Detailed information NTG0976985

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACM6AL_RS04045
• Genome accession: NZ_CP181107
• Coordinates: 833537..834619 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain AG21-0612
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 828537..839619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM6AL_RS04025 (ACM6AL_04025)	gdpS	828909..829979 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
ACM6AL_RS04030 (ACM6AL_04030)	-	830297..831352 (+)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
ACM6AL_RS04035 (ACM6AL_04035)	-	831522..832163 (-)	642	WP_000192947.1	YigZ family protein	-
ACM6AL_RS04040 (ACM6AL_04040)	fakB1	832307..833173 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
ACM6AL_RS04045 (ACM6AL_04045)	comFA	833537..834619 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
ACM6AL_RS04050 (ACM6AL_04050)	-	834612..835286 (+)	675	WP_001057965.1	ComF family protein	-
ACM6AL_RS04055 (ACM6AL_04055)	hpf	835347..835919 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACM6AL_RS04060 (ACM6AL_04060)	secA	836333..838864 (+)	2532	WP_053867669.1	preprotein translocase subunit SecA	-
ACM6AL_RS04065 (ACM6AL_04065)	-	838906..839010 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=976985 ACM6AL_RS04045 WP_001548033.1 833537..834619(+) (comFA) [Staphylococcus aureus strain AG21-0612]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=976985 ACM6AL_RS04045 WP_001548033.1 833537..834619(+) (comFA) [Staphylococcus aureus strain AG21-0612]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367