Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACM3H0_RS06935 Genome accession   NZ_CP180685
Coordinates   1305277..1305459 (-) Length   60 a.a.
NCBI ID   WP_000965649.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain M14     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1300277..1310459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM3H0_RS06910 (ACM3H0_06910) grpE 1301299..1301871 (-) 573 WP_001865751.1 nucleotide exchange factor GrpE -
  ACM3H0_RS06915 (ACM3H0_06915) hrcA 1301874..1302908 (-) 1035 WP_011074698.1 heat-inducible transcriptional repressor HrcA -
  ACM3H0_RS06920 (ACM3H0_06920) - 1303051..1303626 (-) 576 WP_001231504.1 glycoside hydrolase family 73 protein -
  ACM3H0_RS06925 (ACM3H0_06925) - 1303623..1304375 (-) 753 WP_000739660.1 M15 family metallopeptidase -
  ACM3H0_RS06930 (ACM3H0_06930) - 1304372..1305064 (-) 693 WP_000049271.1 histidine phosphatase family protein -
  ACM3H0_RS06935 (ACM3H0_06935) prx 1305277..1305459 (-) 183 WP_000965649.1 hypothetical protein Regulator
  ACM3H0_RS06940 (ACM3H0_06940) - 1305877..1306047 (+) 171 WP_000356856.1 hypothetical protein -
  ACM3H0_RS06945 (ACM3H0_06945) - 1306088..1306288 (-) 201 WP_000076715.1 CsbD family protein -
  ACM3H0_RS06950 (ACM3H0_06950) - 1306397..1306696 (-) 300 WP_000258211.1 STAS-like domain-containing protein -
  ACM3H0_RS06955 (ACM3H0_06955) - 1306690..1307586 (-) 897 WP_001061853.1 sensor histidine kinase -
  ACM3H0_RS06960 (ACM3H0_06960) - 1307716..1309050 (-) 1335 WP_336317628.1 GH25 family lysozyme -
  ACM3H0_RS06965 (ACM3H0_06965) - 1309176..1309430 (-) 255 WP_000611524.1 phage holin -
  ACM3H0_RS06970 (ACM3H0_06970) - 1309432..1309734 (-) 303 WP_000215499.1 hypothetical protein -
  ACM3H0_RS06975 (ACM3H0_06975) - 1309747..1309959 (-) 213 WP_000698337.1 hypothetical protein -
  ACM3H0_RS06980 (ACM3H0_06980) - 1309934..1310260 (-) 327 WP_000404431.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7024.13 Da        Isoelectric Point: 4.1954

>NTDB_id=976047 ACM3H0_RS06935 WP_000965649.1 1305277..1305459(-) (prx) [Streptococcus agalactiae strain M14]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=976047 ACM3H0_RS06935 WP_000965649.1 1305277..1305459(-) (prx) [Streptococcus agalactiae strain M14]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683
  prx Streptococcus pyogenes MGAS315

65

100

0.65
  prx Streptococcus pyogenes MGAS315

65

100

0.65
  prx Streptococcus pyogenes MGAS8232

65

100

0.65
  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567
  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5
  prx Streptococcus pyogenes MGAS315

70.732

68.333

0.483