Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ACM3H0_RS01045 Genome accession   NZ_CP180685
Coordinates   145668..145850 (+) Length   60 a.a.
NCBI ID   WP_000965649.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain M14     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 140668..150850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM3H0_RS01000 (ACM3H0_01000) - 140867..141193 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  ACM3H0_RS01005 (ACM3H0_01005) - 141168..141380 (+) 213 WP_000698337.1 hypothetical protein -
  ACM3H0_RS01010 (ACM3H0_01010) - 141393..141695 (+) 303 WP_000215499.1 hypothetical protein -
  ACM3H0_RS01015 (ACM3H0_01015) - 141697..141951 (+) 255 WP_000611524.1 phage holin -
  ACM3H0_RS01020 (ACM3H0_01020) - 142077..143411 (+) 1335 WP_336317628.1 GH25 family lysozyme -
  ACM3H0_RS01025 (ACM3H0_01025) - 143541..144437 (+) 897 WP_001061853.1 sensor histidine kinase -
  ACM3H0_RS01030 (ACM3H0_01030) - 144431..144730 (+) 300 WP_000258211.1 STAS-like domain-containing protein -
  ACM3H0_RS01035 (ACM3H0_01035) - 144839..145039 (+) 201 WP_000076715.1 CsbD family protein -
  ACM3H0_RS01040 (ACM3H0_01040) - 145080..145250 (-) 171 WP_000356856.1 hypothetical protein -
  ACM3H0_RS01045 (ACM3H0_01045) prx 145668..145850 (+) 183 WP_000965649.1 hypothetical protein Regulator
  ACM3H0_RS01050 (ACM3H0_01050) mutX 146058..146540 (+) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  ACM3H0_RS01055 (ACM3H0_01055) - 146530..146991 (+) 462 WP_000796049.1 NUDIX hydrolase -
  ACM3H0_RS01060 (ACM3H0_01060) - 147083..148273 (+) 1191 WP_001081537.1 AI-2E family transporter -
  ACM3H0_RS01065 (ACM3H0_01065) - 148263..149489 (+) 1227 WP_000934874.1 tetratricopeptide repeat protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7024.13 Da        Isoelectric Point: 4.1954

>NTDB_id=975981 ACM3H0_RS01045 WP_000965649.1 145668..145850(+) (prx) [Streptococcus agalactiae strain M14]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=975981 ACM3H0_RS01045 WP_000965649.1 145668..145850(+) (prx) [Streptococcus agalactiae strain M14]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS8232

65

100

0.65

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5

  prx Streptococcus pyogenes MGAS315

70.732

68.333

0.483


Multiple sequence alignment