Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AABL52_RS13465 | Genome accession | NZ_CP151108 |
| Coordinates | 2602776..2603357 (+) | Length | 193 a.a. |
| NCBI ID | WP_341519649.1 | Uniprot ID | - |
| Organism | Bacillus paramobilis strain IMGN7 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2597776..2608357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABL52_RS13440 (AABL52_13440) | - | 2598911..2600278 (+) | 1368 | WP_341519646.1 | lytic polysaccharide monooxygenase | - |
| AABL52_RS13445 (AABL52_13445) | - | 2600396..2600830 (-) | 435 | WP_341519647.1 | GNAT family N-acetyltransferase | - |
| AABL52_RS13450 (AABL52_13450) | rpiA | 2600934..2601602 (-) | 669 | WP_341519648.1 | ribose 5-phosphate isomerase A | - |
| AABL52_RS13455 (AABL52_13455) | - | 2601604..2601924 (-) | 321 | WP_340420174.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| AABL52_RS13460 (AABL52_13460) | - | 2602068..2602754 (+) | 687 | WP_097844792.1 | RNA polymerase subunit sigma-70 | - |
| AABL52_RS13465 (AABL52_13465) | clpP | 2602776..2603357 (+) | 582 | WP_341519649.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AABL52_RS13470 (AABL52_13470) | - | 2603403..2604260 (-) | 858 | WP_341519650.1 | glycine betaine ABC transporter substrate-binding protein | - |
| AABL52_RS13475 (AABL52_13475) | - | 2604432..2605637 (+) | 1206 | WP_097844795.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| AABL52_RS13480 (AABL52_13480) | - | 2605630..2606466 (+) | 837 | WP_000095064.1 | proline/glycine betaine ABC transporter permease | - |
| AABL52_RS13485 (AABL52_13485) | - | 2606516..2606752 (-) | 237 | WP_141524357.1 | hypothetical protein | - |
| AABL52_RS13490 (AABL52_13490) | - | 2606969..2607136 (+) | 168 | WP_144563761.1 | septum formation initiator | - |
| AABL52_RS13495 (AABL52_13495) | - | 2607249..2608073 (+) | 825 | WP_341519651.1 | PP2C family serine/threonine-protein phosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21215.48 Da Isoelectric Point: 5.0925
>NTDB_id=974884 AABL52_RS13465 WP_341519649.1 2602776..2603357(+) (clpP) [Bacillus paramobilis strain IMGN7]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINEQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKRDINKMIAEKTGQ
SIERVAHDTERDYFMTAAEAKEYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINEQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKRDINKMIAEKTGQ
SIERVAHDTERDYFMTAAEAKEYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=974884 AABL52_RS13465 WP_341519649.1 2602776..2603357(+) (clpP) [Bacillus paramobilis strain IMGN7]
ATGAATGCAATTCCATATGTAGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATAAATGAACAAGTAGCAAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCGG
AAGATGCTGAGAAAGATATATTTTTATACATTAACAGCCCAGGCGGCTCGACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATCTCATTAAACCAGATGTACAAACGCTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGGAAACGGTTTGCACTCCCTAATAGTGAAATTATGATTCACCAGCCACTAGGTGGTGCGCAAGGTCAGGCAA
CGGAAATTGAAATAACAGCAAAAAGAATACTAAAGTTAAAGCGTGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
TCAATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGCAGAAGCGAAAGAATATGGGATAGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATAAATGAACAAGTAGCAAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCGG
AAGATGCTGAGAAAGATATATTTTTATACATTAACAGCCCAGGCGGCTCGACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATCTCATTAAACCAGATGTACAAACGCTATGCATGGGATTTGCAGCATCATTTGGTGCATTGTTATTATTATCAGG
TGCAAAAGGGAAACGGTTTGCACTCCCTAATAGTGAAATTATGATTCACCAGCCACTAGGTGGTGCGCAAGGTCAGGCAA
CGGAAATTGAAATAACAGCAAAAAGAATACTAAAGTTAAAGCGTGATATTAATAAAATGATTGCAGAAAAAACAGGGCAA
TCAATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGCAGAAGCGAAAGAATATGGGATAGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
67.539 |
98.964 |
0.668 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus pneumoniae Rx1 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae D39 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae R6 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMG 18311 |
54.688 |
99.482 |
0.544 |
| clpP | Streptococcus thermophilus LMD-9 |
54.688 |
99.482 |
0.544 |
| clpP | Streptococcus pyogenes JRS4 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus pyogenes MGAS315 |
53.968 |
97.927 |
0.528 |
| clpP | Streptococcus mutans UA159 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.794 |
97.927 |
0.497 |