Detailed information NTG0973445

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: WF295_RS19710
• Genome accession: NZ_CP150885
• Coordinates: 3897163..3897735 (-)
• Length: 190 a.a.
• NCBI ID: WP_020453223.1
• Uniprot ID: -
• Organism: Bacillus paralicheniformis strain Baplich1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3892163..3902735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WF295_RS19690 (WF295_19690)	-	3893222..3894520 (+)	1299	WP_041817345.1	hemolysin family protein	-
WF295_RS19695 (WF295_19695)	-	3894669..3895695 (+)	1027	Protein_3832	ammonium transporter	-
WF295_RS19700 (WF295_19700)	-	3895714..3896064 (+)	351	WP_003185936.1	P-II family nitrogen regulator	-
WF295_RS19705 (WF295_19705)	-	3896288..3896671 (+)	384	WP_020453222.1	hypothetical protein	-
WF295_RS19710 (WF295_19710)	clpP	3897163..3897735 (-)	573	WP_020453223.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WF295_RS19715 (WF295_19715)	-	3897749..3898354 (-)	606	WP_020453224.1	RNA polymerase sigma factor	-
WF295_RS19720 (WF295_19720)	-	3898490..3899365 (-)	876	WP_020453225.1	M23 family metallopeptidase	-
WF295_RS19725 (WF295_19725)	-	3899559..3900056 (+)	498	WP_020453226.1	GNAT family N-acetyltransferase	-
WF295_RS19730 (WF295_19730)	-	3900107..3900550 (-)	444	WP_020453227.1	YwnF family protein	-
WF295_RS19735 (WF295_19735)	cls	3900798..3902246 (+)	1449	WP_041817474.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21023.10 Da
• Isoelectric Point: 4.9212

>NTDB_id=973445 WF295_RS19710 WP_020453223.1 3897163..3897735(-) (clpP) [Bacillus paralicheniformis strain Baplich1]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAILDT
MDYVNPDVRTICVGMAASMGAILLAGGTKGKRYALKNSEIMIHQPLGGVKGQATDMEISAKRIIKLREKIEHFFNERTGQ
PIEKLKADMERDYFMDADEAKAYGVIDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=973445 WF295_RS19710 WP_020453223.1 3897163..3897735(-) (clpP) [Bacillus paralicheniformis strain Baplich1]
ATGAACACCATACCTTACGTCATTGAGAAAACGGCTGCCGGTGAAAGATCGTACGATATTTTTTCCAGACTTTTAAAAGA
CCGGATCATTATGATCGGCTCTGAATTCAACGATGACCTCGCCAATCGGGTCACCGCCCAGTTGCTGTTTTTGTCAGCCG
AAGACAATGAAAAAGACATTTCGATCTATATCAACAGCCCGGGCGGATCAACTTCCGCGGGATATGCGATTTTGGATACG
ATGGACTATGTGAACCCGGATGTCCGCACGATCTGCGTCGGAATGGCAGCTTCCATGGGAGCGATTCTCCTCGCCGGCGG
AACAAAAGGCAAACGGTATGCGCTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CAGACATGGAGATTTCAGCGAAGCGGATCATCAAACTGAGGGAAAAAATCGAGCACTTTTTTAACGAACGAACGGGCCAG
CCCATTGAAAAACTAAAAGCCGACATGGAACGTGATTATTTTATGGATGCGGACGAAGCGAAGGCATACGGTGTGATTGA
CGCTGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	64.737	100	0.647
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.497	98.421	0.605
clpP	Streptococcus thermophilus LMG 18311	55.556	99.474	0.553
clpP	Streptococcus thermophilus LMD-9	55.556	99.474	0.553
clpP	Streptococcus pyogenes MGAS315	54.497	99.474	0.542
clpP	Streptococcus pyogenes JRS4	54.497	99.474	0.542
clpP	Streptococcus pneumoniae D39	54.497	99.474	0.542
clpP	Streptococcus pneumoniae R6	54.497	99.474	0.542
clpP	Streptococcus pneumoniae TIGR4	54.497	99.474	0.542
clpP	Streptococcus pneumoniae Rx1	54.497	99.474	0.542
clpP	Streptococcus mutans UA159	53.968	99.474	0.537
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	99.474	0.521
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	99.474	0.511