Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | WN777_RS25555 | Genome accession | NZ_CP150839 |
| Coordinates | 4922386..4922967 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus pacificus strain SG15 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4917386..4927967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN777_RS25515 (WN777_25495) | - | 4917824..4918177 (-) | 354 | WP_139868337.1 | YxeA family protein | - |
| WN777_RS25520 (WN777_25500) | - | 4918383..4918589 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| WN777_RS25525 (WN777_25505) | - | 4918683..4919168 (+) | 486 | WP_139868339.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| WN777_RS25530 (WN777_25510) | spoVAC | 4919198..4919674 (+) | 477 | WP_000095407.1 | stage V sporulation protein AC | - |
| WN777_RS25535 (WN777_25515) | spoVAD | 4919675..4920691 (+) | 1017 | WP_000938952.1 | stage V sporulation protein AD | - |
| WN777_RS25540 (WN777_25520) | spoVAE | 4920688..4921038 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| WN777_RS25545 (WN777_25525) | - | 4921048..4921254 (+) | 207 | WP_000215900.1 | DUF1657 domain-containing protein | - |
| WN777_RS25550 (WN777_25530) | - | 4921275..4922144 (+) | 870 | WP_000018910.1 | DUF421 domain-containing protein | - |
| WN777_RS25555 (WN777_25535) | clpP | 4922386..4922967 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| WN777_RS25560 (WN777_25540) | - | 4923373..4923621 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| WN777_RS25565 (WN777_25545) | whiA | 4923645..4924595 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| WN777_RS25570 (WN777_25550) | yvcK | 4924685..4925638 (-) | 954 | WP_000712175.1 | YvcK family protein | - |
| WN777_RS25575 (WN777_25555) | rapZ | 4925642..4926523 (-) | 882 | WP_000138457.1 | RNase adapter RapZ | - |
| WN777_RS25580 (WN777_25560) | - | 4926544..4927002 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=972851 WN777_RS25555 WP_001049162.1 4922386..4922967(+) (clpP) [Bacillus pacificus strain SG15]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=972851 WN777_RS25555 WP_001049162.1 4922386..4922967(+) (clpP) [Bacillus pacificus strain SG15]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCGGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCGGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |