Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | WOC64_RS08315 | Genome accession | NZ_CP150788 |
| Coordinates | 1649965..1650264 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20816 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1644965..1655264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC64_RS08275 (WOC64_08280) | - | 1645026..1645229 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| WOC64_RS08280 (WOC64_08285) | - | 1645226..1646212 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| WOC64_RS08285 (WOC64_08290) | - | 1646212..1646541 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| WOC64_RS08290 (WOC64_08295) | - | 1646538..1647161 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| WOC64_RS08295 (WOC64_08300) | comGA | 1647213..1648187 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| WOC64_RS08300 (WOC64_08305) | comGB | 1648159..1649229 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| WOC64_RS08305 (WOC64_08310) | comGC | 1649243..1649554 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| WOC64_RS08310 (WOC64_08315) | comGD | 1649532..1649978 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| WOC64_RS08315 (WOC64_08320) | comGE | 1649965..1650264 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| WOC64_RS08320 (WOC64_08325) | comGF | 1650182..1650679 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| WOC64_RS08325 (WOC64_08330) | - | 1650776..1650922 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| WOC64_RS08330 (WOC64_08335) | - | 1650912..1651436 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| WOC64_RS08335 (WOC64_08340) | gcvT | 1651595..1652686 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| WOC64_RS08340 (WOC64_08345) | gcvPA | 1652706..1654052 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=972670 WOC64_RS08315 WP_000844413.1 1649965..1650264(+) (comGE) [Staphylococcus aureus strain TUM20816]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=972670 WOC64_RS08315 WP_000844413.1 1649965..1650264(+) (comGE) [Staphylococcus aureus strain TUM20816]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |