Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | WN947_RS17215 | Genome accession | NZ_CP150491 |
| Coordinates | 3452498..3452956 (+) | Length | 152 a.a. |
| NCBI ID | WP_003388831.1 | Uniprot ID | M8E057 |
| Organism | Brevibacillus borstelensis strain S8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3447498..3457956
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN947_RS17190 | - | 3447613..3447702 (-) | 90 | WP_031932431.1 | YjcZ family sporulation protein | - |
| WN947_RS17195 | pepF | 3448053..3449963 (+) | 1911 | WP_003388837.1 | oligoendopeptidase F | - |
| WN947_RS17200 | - | 3450017..3450553 (-) | 537 | WP_024983209.1 | GNAT family protein | - |
| WN947_RS17205 | ychF | 3450941..3452041 (+) | 1101 | WP_003388835.1 | redox-regulated ATPase YchF | - |
| WN947_RS17210 | rpsF | 3452181..3452468 (+) | 288 | WP_003388833.1 | 30S ribosomal protein S6 | - |
| WN947_RS17215 | ssbA | 3452498..3452956 (+) | 459 | WP_003388831.1 | single-stranded DNA-binding protein | Machinery gene |
| WN947_RS17220 | rpsR | 3453013..3453243 (+) | 231 | WP_003388829.1 | 30S ribosomal protein S18 | - |
| WN947_RS17225 | - | 3453350..3454258 (+) | 909 | WP_003388828.1 | DUF2232 domain-containing protein | - |
| WN947_RS17230 | - | 3454263..3456200 (+) | 1938 | WP_003388827.1 | DHH family phosphoesterase | - |
| WN947_RS17235 | rplI | 3456231..3456674 (+) | 444 | WP_003388826.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 16530.56 Da Isoelectric Point: 5.2853
>NTDB_id=970657 WN947_RS17215 WP_003388831.1 3452498..3452956(+) (ssbA) [Brevibacillus borstelensis strain S8]
MNKVILIGNLTKDPELRYTPNGVAVTTFTLAINRPRTNQAGEREADFINIVAWQKLADLCATYLRKGRQAAVEGRIQTRS
YDNKEGKKVYVTEVVAENVQFLGGKGGEGGGYDPGFGGMKPSGGQRDEMDAFGDPFANTGKPINISDDDLPF
MNKVILIGNLTKDPELRYTPNGVAVTTFTLAINRPRTNQAGEREADFINIVAWQKLADLCATYLRKGRQAAVEGRIQTRS
YDNKEGKKVYVTEVVAENVQFLGGKGGEGGGYDPGFGGMKPSGGQRDEMDAFGDPFANTGKPINISDDDLPF
Nucleotide
Download Length: 459 bp
>NTDB_id=970657 WN947_RS17215 WP_003388831.1 3452498..3452956(+) (ssbA) [Brevibacillus borstelensis strain S8]
ATGAATAAAGTCATTCTCATCGGCAACCTGACAAAAGATCCGGAGCTGCGCTATACGCCAAACGGCGTGGCCGTTACTAC
CTTTACCCTGGCGATCAACCGTCCGCGTACCAACCAGGCAGGCGAACGCGAAGCCGACTTTATTAACATCGTCGCATGGC
AGAAGCTGGCTGACTTGTGCGCTACCTATCTGCGCAAAGGCAGACAAGCGGCTGTGGAGGGCCGTATTCAAACGCGCTCT
TATGATAATAAAGAAGGAAAAAAGGTTTACGTAACGGAAGTCGTCGCTGAAAACGTCCAGTTCTTGGGCGGAAAAGGCGG
AGAAGGCGGCGGTTACGATCCAGGCTTTGGCGGCATGAAGCCGTCGGGCGGTCAGAGAGATGAGATGGATGCGTTTGGGG
ATCCCTTTGCGAATACAGGCAAGCCGATCAACATCTCGGATGATGACTTGCCGTTTTGA
ATGAATAAAGTCATTCTCATCGGCAACCTGACAAAAGATCCGGAGCTGCGCTATACGCCAAACGGCGTGGCCGTTACTAC
CTTTACCCTGGCGATCAACCGTCCGCGTACCAACCAGGCAGGCGAACGCGAAGCCGACTTTATTAACATCGTCGCATGGC
AGAAGCTGGCTGACTTGTGCGCTACCTATCTGCGCAAAGGCAGACAAGCGGCTGTGGAGGGCCGTATTCAAACGCGCTCT
TATGATAATAAAGAAGGAAAAAAGGTTTACGTAACGGAAGTCGTCGCTGAAAACGTCCAGTTCTTGGGCGGAAAAGGCGG
AGAAGGCGGCGGTTACGATCCAGGCTTTGGCGGCATGAAGCCGTCGGGCGGTCAGAGAGATGAGATGGATGCGTTTGGGG
ATCCCTTTGCGAATACAGGCAAGCCGATCAACATCTCGGATGATGACTTGCCGTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
53.488 |
100 |
0.605 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.787 |
100 |
0.487 |
| ssb | Vibrio cholerae strain A1552 |
36.207 |
100 |
0.414 |
| ssb | Neisseria gonorrhoeae MS11 |
36.047 |
100 |
0.408 |
| ssb | Neisseria meningitidis MC58 |
35.465 |
100 |
0.401 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
52.252 |
73.026 |
0.382 |
| ssb | Glaesserella parasuis strain SC1401 |
31.638 |
100 |
0.368 |