Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | SOZ35_RS18140 | Genome accession | NZ_CP150480 |
| Coordinates | 3575027..3575623 (+) | Length | 198 a.a. |
| NCBI ID | WP_003326811.1 | Uniprot ID | A0AAP3CU21 |
| Organism | Bacillus atrophaeus strain TL401 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3570027..3580623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOZ35_RS18105 (SOZ35_18105) | aspP | 3570396..3571958 (+) | 1563 | WP_340639865.1 | aspartate/proton symporter AspP | - |
| SOZ35_RS18110 (SOZ35_18110) | - | 3572063..3572647 (+) | 585 | WP_003326817.1 | TetR family transcriptional regulator | - |
| SOZ35_RS18115 (SOZ35_18115) | - | 3572729..3573064 (+) | 336 | WP_010790011.1 | SMR family transporter | - |
| SOZ35_RS18120 (SOZ35_18120) | - | 3573064..3573378 (+) | 315 | WP_268385279.1 | multidrug efflux SMR transporter | - |
| SOZ35_RS18125 (SOZ35_18125) | speG | 3573404..3573931 (+) | 528 | WP_003326814.1 | spermidine N1-acetyltransferase | - |
| SOZ35_RS18130 (SOZ35_18130) | - | 3574019..3574504 (-) | 486 | WP_268520142.1 | DinB family protein | - |
| SOZ35_RS18140 (SOZ35_18140) | clpP | 3575027..3575623 (+) | 597 | WP_003326811.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| SOZ35_RS18145 (SOZ35_18145) | - | 3575657..3576265 (-) | 609 | WP_061669208.1 | DJ-1/PfpI family protein | - |
| SOZ35_RS18150 (SOZ35_18150) | - | 3576350..3576925 (-) | 576 | WP_003326809.1 | TIGR00730 family Rossman fold protein | - |
| SOZ35_RS18155 (SOZ35_18155) | - | 3577040..3577360 (+) | 321 | WP_010790015.1 | MazG-like family protein | - |
| SOZ35_RS18160 (SOZ35_18160) | sulP | 3577387..3578997 (-) | 1611 | WP_340639866.1 | sulfate permease | - |
| SOZ35_RS18165 (SOZ35_18165) | - | 3579016..3579600 (-) | 585 | WP_010790017.1 | carbonic anhydrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21877.15 Da Isoelectric Point: 4.7114
>NTDB_id=970514 SOZ35_RS18140 WP_003326811.1 3575027..3575623(+) (clpP) [Bacillus atrophaeus strain TL401]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=970514 SOZ35_RS18140 WP_003326811.1 3575027..3575623(+) (clpP) [Bacillus atrophaeus strain TL401]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.455 |
100 |
0.955 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus thermophilus LMD-9 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.124 |
97.98 |
0.53 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |