Detailed information NTG0968488

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: MKX80_RS19940
• Genome accession: NZ_CP150260
• Coordinates: 3905963..3906535 (-)
• Length: 190 a.a.
• NCBI ID: WP_003185937.1
• Uniprot ID: A0A415J8E4
• Organism: Bacillus sp. FSL K6-0972
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3900963..3911535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX80_RS19920 (MKX80_19920)	-	3901878..3903176 (+)	1299	WP_268310519.1	hemolysin family protein	-
MKX80_RS19925 (MKX80_19925)	-	3903337..3904548 (+)	1212	WP_154996072.1	ammonium transporter	-
MKX80_RS19930 (MKX80_19930)	-	3904567..3904917 (+)	351	WP_003185936.1	P-II family nitrogen regulator	-
MKX80_RS19935 (MKX80_19935)	-	3905143..3905538 (+)	396	WP_216929875.1	hypothetical protein	-
MKX80_RS19940 (MKX80_19940)	clpP	3905963..3906535 (-)	573	WP_003185937.1	ATP-dependent Clp protease proteolytic subunit	Regulator
MKX80_RS19945 (MKX80_19945)	-	3906549..3907154 (-)	606	WP_268342580.1	sigma-70 family RNA polymerase sigma factor	-
MKX80_RS19950 (MKX80_19950)	-	3907290..3908165 (-)	876	WP_154996076.1	M23 family metallopeptidase	-
MKX80_RS19955 (MKX80_19955)	-	3908359..3908856 (+)	498	WP_268298697.1	GNAT family N-acetyltransferase	-
MKX80_RS19960 (MKX80_19960)	-	3908907..3909350 (-)	444	WP_268342579.1	YwnF family protein	-
MKX80_RS19965 (MKX80_19965)	cls	3909599..3911047 (+)	1449	WP_182071105.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21049.23 Da
• Isoelectric Point: 5.3785

>NTDB_id=968488 MKX80_RS19940 WP_003185937.1 3905963..3906535(-) (clpP) [Bacillus sp. FSL K6-0972]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAILDT
MDYVKPDVRTICVGMAASMGAILLAGGAKGKRYALKNSEIMIHQPLGGVKGQATDMEISAKRIIKLREKIERFFHERTGQ
PIEKLKADMERDYFMDADEAKAYGVIDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=968488 MKX80_RS19940 WP_003185937.1 3905963..3906535(-) (clpP) [Bacillus sp. FSL K6-0972]
ATGAACACCATTCCTTACGTCATTGAGAAAACGGCTGCCGGTGAAAGATCGTACGATATTTTTTCCAGACTTTTAAAAGA
CCGGATCATTATGATCGGCTCTGAATTCAACGATGACCTCGCCAATCGGGTCACCGCCCAATTGCTGTTTTTGTCAGCGG
AGGACAATGAAAAAGACATTTCGATCTATATCAACAGCCCAGGCGGATCAACTTCCGCGGGATATGCGATTTTGGATACG
ATGGATTATGTGAAGCCGGATGTCCGCACGATCTGCGTCGGAATGGCAGCTTCTATGGGAGCGATTCTCCTCGCCGGCGG
AGCAAAAGGCAAACGGTATGCGCTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CAGACATGGAGATTTCAGCGAAGCGGATCATCAAACTGAGGGAAAAAATCGAGCGCTTCTTTCACGAACGAACGGGCCAG
CCCATTGAAAAACTAAAAGCCGACATGGAACGCGATTACTTTATGGATGCGGACGAAGCGAAGGCATACGGTGTTATTGA
TGCTGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

3D structure

• AlphaFold DB: A0A415J8E4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	65.263	100	0.653
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.567	98.421	0.616
clpP	Streptococcus thermophilus LMD-9	55.556	99.474	0.553
clpP	Streptococcus pneumoniae Rx1	55.556	99.474	0.553
clpP	Streptococcus pneumoniae D39	55.556	99.474	0.553
clpP	Streptococcus thermophilus LMG 18311	55.556	99.474	0.553
clpP	Streptococcus pneumoniae R6	55.556	99.474	0.553
clpP	Streptococcus pneumoniae TIGR4	55.556	99.474	0.553
clpP	Streptococcus mutans UA159	55.026	99.474	0.547
clpP	Streptococcus pyogenes JRS4	54.497	99.474	0.542
clpP	Streptococcus pyogenes MGAS315	54.497	99.474	0.542
clpP	Lactococcus lactis subsp. cremoris KW2	51.852	99.474	0.516
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	99.474	0.511