Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | ACK2VH_RS29475 | Genome accession | NZ_CP176684 |
| Coordinates | 6397737..6398762 (-) | Length | 341 a.a. |
| NCBI ID | WP_003097294.1 | Uniprot ID | A0A0H2ZJL6 |
| Organism | Pseudomonas aeruginosa strain GTVSS-024 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6392737..6403762
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2VH_RS29450 (ACK2VH_29445) | aroE | 6392939..6393763 (-) | 825 | WP_003097314.1 | shikimate dehydrogenase | - |
| ACK2VH_RS29455 (ACK2VH_29450) | hemF | 6393821..6394738 (-) | 918 | WP_003097311.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| ACK2VH_RS29460 (ACK2VH_29455) | - | 6394929..6395906 (+) | 978 | WP_003097303.1 | NADPH:quinone reductase | - |
| ACK2VH_RS29465 (ACK2VH_29460) | - | 6395916..6396473 (-) | 558 | WP_003097300.1 | L-threonylcarbamoyladenylate synthase | - |
| ACK2VH_RS29470 (ACK2VH_29465) | dprA | 6396514..6397602 (-) | 1089 | WP_014602326.1 | DNA-processing protein DprA | Machinery gene |
| ACK2VH_RS29475 (ACK2VH_29470) | tsaP | 6397737..6398762 (-) | 1026 | WP_003097294.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| ACK2VH_RS29480 (ACK2VH_29475) | def | 6398901..6399407 (+) | 507 | WP_003107059.1 | peptide deformylase | - |
| ACK2VH_RS29485 (ACK2VH_29480) | fmt | 6399462..6400406 (+) | 945 | WP_003123763.1 | methionyl-tRNA formyltransferase | - |
| ACK2VH_RS29490 (ACK2VH_29485) | rsmB | 6400403..6401707 (+) | 1305 | WP_153655610.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| ACK2VH_RS29495 (ACK2VH_29490) | trkA | 6401735..6403108 (+) | 1374 | WP_003107053.1 | Trk system potassium transporter TrkA | - |
| ACK2VH_RS29500 (ACK2VH_29495) | - | 6403257..6403574 (+) | 318 | WP_003120685.1 | tetratricopeptide repeat protein | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37586.01 Da Isoelectric Point: 9.3358
>NTDB_id=968415 ACK2VH_RS29475 WP_003097294.1 6397737..6398762(-) (tsaP) [Pseudomonas aeruginosa strain GTVSS-024]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
Nucleotide
Download Length: 1026 bp
>NTDB_id=968415 ACK2VH_RS29475 WP_003097294.1 6397737..6398762(-) (tsaP) [Pseudomonas aeruginosa strain GTVSS-024]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
36.512 |
100 |
0.393 |