Detailed information NTG0968101

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MKZ05_RS16160
• Genome accession: NZ_CP150255
• Coordinates: 3179259..3179945 (-)
• Length: 228 a.a.
• NCBI ID: WP_212045588.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M8-0277
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3174259..3184945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKZ05_RS16125 (MKZ05_16125)	fliW	3174392..3174826 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
MKZ05_RS16130 (MKZ05_16130)	-	3174855..3175433 (-)	579	WP_003213106.1	DUF6470 family protein	-
MKZ05_RS16135 (MKZ05_16135)	flgL	3175482..3176393 (-)	912	WP_106030071.1	flagellar hook-associated protein FlgL	-
MKZ05_RS16140 (MKZ05_16140)	flgK	3176403..3177923 (-)	1521	WP_003213544.1	flagellar hook-associated protein FlgK	-
MKZ05_RS16145 (MKZ05_16145)	-	3177939..3178421 (-)	483	WP_050944342.1	flagellar protein FlgN	-
MKZ05_RS16150 (MKZ05_16150)	flgM	3178440..3178703 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MKZ05_RS16155 (MKZ05_16155)	-	3178783..3179202 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
MKZ05_RS16160 (MKZ05_16160)	comFC	3179259..3179945 (-)	687	WP_212045588.1	ComF family protein	Machinery gene
MKZ05_RS16165 (MKZ05_16165)	-	3179942..3180235 (-)	294	WP_106066158.1	late competence development ComFB family protein	-
MKZ05_RS16170 (MKZ05_16170)	comFA	3180302..3181426 (-)	1125	WP_339160557.1	DEAD/DEAH box helicase	Machinery gene
MKZ05_RS16175 (MKZ05_16175)	-	3181801..3182643 (-)	843	WP_226804196.1	DegV family protein	-
MKZ05_RS16180 (MKZ05_16180)	degU	3182861..3183550 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MKZ05_RS16185 (MKZ05_16185)	degS	3183615..3184790 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26054.55 Da
• Isoelectric Point: 9.8858

>NTDB_id=968101 MKZ05_RS16160 WP_212045588.1 3179259..3179945(-) (comFC) [Bacillus sp. FSL M8-0277]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSNDQLCQDCSMWKERPDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVRAVFKRSFSMKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QSKQSKKKKNERLYQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=968101 MKZ05_RS16160 WP_212045588.1 3179259..3179945(-) (comFC) [Bacillus sp. FSL M8-0277]
TTGATCTGCCTCATTTGTGAGGGACATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAACGATC
AATTATGTCAAGACTGTTCCATGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCGAGCAGTATTTAAGCGCTCTTTTTCAATGAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCGCTTGTGAAAATACAT
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTATATCAAAAAGGAATGTTTCAAATCAAGCAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (163-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.435	100	0.509
comFC/cflB	Streptococcus mitis NCTC 12261	39.301	100	0.395
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae TIGR4	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae Rx1	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae D39	39.301	100	0.395
comFC/cflB	Streptococcus pneumoniae R6	39.301	100	0.395