Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   MKY10_RS09095 Genome accession   NZ_CP150253
Coordinates   1707350..1708117 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus sp. FSL P4-0290     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1702350..1713117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS09065 (MKY10_09065) pgpH 1702646..1704781 (+) 2136 WP_015251683.1 cyclic-di-AMP phosphodiesterase PgpH -
  MKY10_RS09070 (MKY10_09070) ybeY 1704782..1705255 (+) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  MKY10_RS09075 (MKY10_09075) - 1705236..1705607 (+) 372 WP_080529555.1 diacylglycerol kinase family protein -
  MKY10_RS09080 (MKY10_09080) - 1705726..1706136 (+) 411 WP_003230049.1 cytidine deaminase -
  MKY10_RS09085 (MKY10_09085) era 1706117..1707022 (+) 906 WP_003230051.1 GTPase Era -
  MKY10_RS09090 (MKY10_09090) - 1707170..1707313 (+) 144 WP_003230053.1 YqzL family protein -
  MKY10_RS09095 (MKY10_09095) recO 1707350..1708117 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  MKY10_RS09100 (MKY10_09100) glyQ 1708414..1709301 (+) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  MKY10_RS09105 (MKY10_09105) glyS 1709294..1711333 (+) 2040 WP_048655099.1 glycine--tRNA ligase subunit beta -
  MKY10_RS09110 (MKY10_09110) ccpN 1711466..1712104 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  MKY10_RS09115 (MKY10_09115) - 1712130..1712942 (+) 813 WP_015251688.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=967958 MKY10_RS09095 WP_014477369.1 1707350..1708117(+) (recO) [Bacillus sp. FSL P4-0290]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=967958 MKY10_RS09095 WP_014477369.1 1707350..1708117(+) (recO) [Bacillus sp. FSL P4-0290]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment