Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKZ14_RS05435 Genome accession   NZ_CP150202
Coordinates   1148347..1149606 (+) Length   419 a.a.
NCBI ID   WP_026023399.1    Uniprot ID   -
Organism   Lysinibacillus sp. FSL P2-0066     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1143347..1154606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ14_RS05405 (MKZ14_05405) - 1143421..1144722 (+) 1302 WP_333006465.1 pitrilysin family protein -
  MKZ14_RS05410 (MKZ14_05410) - 1144719..1145447 (+) 729 WP_333006466.1 SDR family oxidoreductase -
  MKZ14_RS05415 (MKZ14_05415) - 1145493..1145750 (+) 258 WP_004224939.1 DUF3243 domain-containing protein -
  MKZ14_RS05420 (MKZ14_05420) - 1145967..1146752 (+) 786 WP_026023397.1 DUF3388 domain-containing protein -
  MKZ14_RS05425 (MKZ14_05425) - 1146769..1147704 (+) 936 WP_333006467.1 helix-turn-helix domain-containing protein -
  MKZ14_RS05430 (MKZ14_05430) pgsA 1147752..1148330 (+) 579 WP_016992833.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKZ14_RS05435 (MKZ14_05435) cinA 1148347..1149606 (+) 1260 WP_026023399.1 competence/damage-inducible protein A Machinery gene
  MKZ14_RS05440 (MKZ14_05440) recA 1149768..1150832 (+) 1065 WP_016992835.1 recombinase RecA Machinery gene
  MKZ14_RS05445 (MKZ14_05445) rny 1151356..1152915 (+) 1560 WP_036080352.1 ribonuclease Y -
  MKZ14_RS05450 (MKZ14_05450) - 1153143..1153871 (+) 729 WP_333006470.1 Wzz/FepE/Etk N-terminal domain-containing protein -
  MKZ14_RS05455 (MKZ14_05455) - 1153871..1154572 (+) 702 WP_333006471.1 CpsD/CapB family tyrosine-protein kinase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45302.77 Da        Isoelectric Point: 4.9773

>NTDB_id=966214 MKZ14_RS05435 WP_026023399.1 1148347..1149606(+) (cinA) [Lysinibacillus sp. FSL P2-0066]
MNAEILAVGSELLLGQITNTNARFISSQLSELGINVFYHTVVGDNAKRLEQAIEVAESRADLIIFSGGLGPTKDDLTKET
IARHLGVSLEFDEVALTYIEQFFAKRGRPMTENNRKQALILAGSEVLANHHGMAPGMIFTKNDRTYILLPGPPKELEPMF
QFEAKPKLAAMLNDGGIIASHVMRFYGIGEAELEVQVQNILDAQTNPTVAPLASDGEVTLRVTAKAATEQQARQLIKAKV
AEIQALVGDYQYGVDDDSLASKTVEMLLDNKLTIAAAESLTAGLFQSELAEIPGVGNALIGGVVTYAADAKVKQLGISQE
LIDTHGVVSAECAAAMASAVREKFATNIGIGLTGEAGPTAHDHQPVGTVWIGIAINDEEPLTYLLHLSGMRNTNRLRAVK
FTCHYLMQLLEERGYTKRY

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=966214 MKZ14_RS05435 WP_026023399.1 1148347..1149606(+) (cinA) [Lysinibacillus sp. FSL P2-0066]
ATGAATGCTGAAATTCTTGCGGTTGGCTCAGAACTATTATTAGGTCAAATTACGAATACAAATGCGAGATTTATCTCAAG
CCAGCTATCCGAGCTTGGCATCAACGTTTTTTATCATACCGTAGTGGGCGATAATGCAAAGCGTTTAGAACAAGCTATCG
AAGTGGCAGAGTCTCGTGCAGATCTCATTATTTTTTCGGGAGGACTGGGTCCAACAAAAGATGATTTAACGAAGGAAACG
ATTGCACGTCATCTTGGTGTTTCTCTTGAGTTTGATGAAGTAGCATTGACGTATATTGAGCAATTTTTTGCTAAACGAGG
ACGTCCAATGACGGAAAATAATCGTAAACAGGCATTAATTTTAGCAGGGAGTGAAGTATTAGCTAATCACCATGGAATGG
CTCCAGGTATGATCTTCACAAAAAATGATCGCACTTATATTTTATTACCAGGACCTCCAAAAGAGTTAGAACCAATGTTT
CAATTTGAGGCTAAACCTAAACTTGCTGCGATGCTTAATGATGGAGGGATCATTGCATCACATGTTATGCGATTTTATGG
AATTGGTGAGGCCGAGCTTGAAGTACAAGTTCAAAATATTTTAGATGCACAAACCAATCCAACAGTTGCTCCACTTGCTT
CTGATGGTGAGGTAACGTTACGCGTAACAGCTAAAGCCGCAACAGAGCAGCAAGCTAGGCAGCTTATTAAGGCAAAGGTT
GCGGAAATACAAGCACTTGTTGGTGATTATCAATATGGTGTAGATGATGATTCCCTTGCCTCAAAAACGGTAGAAATGCT
ATTGGATAATAAGCTAACAATCGCGGCTGCAGAAAGTTTAACTGCTGGGTTATTTCAATCTGAGCTTGCGGAAATTCCAG
GGGTAGGAAATGCTCTTATAGGAGGCGTTGTTACCTATGCAGCAGATGCGAAAGTAAAACAGCTAGGCATTTCACAAGAA
TTAATTGATACACATGGTGTTGTGAGTGCTGAGTGTGCGGCGGCAATGGCAAGTGCTGTTCGTGAGAAATTTGCTACAAA
TATTGGGATTGGCCTTACAGGAGAAGCAGGTCCCACTGCGCATGATCATCAGCCAGTAGGTACTGTTTGGATTGGTATTG
CCATAAATGATGAGGAGCCGCTTACATATTTACTTCATTTATCAGGCATGCGGAATACGAATCGGCTCCGTGCGGTGAAA
TTTACATGCCACTATTTAATGCAGCTGTTAGAAGAACGTGGCTACACAAAACGTTATTAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(257-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

52.184

98.329

0.513
  cinA Streptococcus mitis SK321

45.17

91.408

0.413
  cinA Streptococcus pneumoniae Rx1

44.909

91.408

0.411
  cinA Streptococcus pneumoniae TIGR4

44.909

91.408

0.411
  cinA Streptococcus pneumoniae R6

44.909

91.408

0.411
  cinA Streptococcus pneumoniae D39

44.648

91.408

0.408
  cinA Streptococcus mitis NCTC 12261

44.386

91.408

0.406
  cinA Streptococcus mutans UA159

44.063

90.453

0.399

Multiple sequence alignment