Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   NYE79_RS01535 Genome accession   NZ_CP150168
Coordinates   272504..274000 (+) Length   498 a.a.
NCBI ID   WP_000759894.1    Uniprot ID   A0A139PWX2
Organism   Streptococcus sp. FSL W8-0197     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 267504..279000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS01515 (NYE79_01515) endA 267662..268486 (+) 825 WP_339293739.1 DNA/RNA non-specific endonuclease Machinery gene
  NYE79_RS01520 (NYE79_01520) - 268623..269954 (+) 1332 WP_339293740.1 hemolysin family protein -
  NYE79_RS01530 (NYE79_01530) amiA 270458..272437 (+) 1980 WP_000749711.1 peptide ABC transporter substrate-binding protein Regulator
  NYE79_RS01535 (NYE79_01535) amiC 272504..274000 (+) 1497 WP_000759894.1 ABC transporter permease Regulator
  NYE79_RS01540 (NYE79_01540) amiD 274000..274926 (+) 927 WP_000103692.1 oligopeptide ABC transporter permease OppC Regulator
  NYE79_RS01545 (NYE79_01545) amiE 274935..276002 (+) 1068 WP_049519748.1 ABC transporter ATP-binding protein Regulator
  NYE79_RS01550 (NYE79_01550) amiF 276013..276942 (+) 930 WP_049519746.1 ATP-binding cassette domain-containing protein Regulator
  NYE79_RS01555 (NYE79_01555) - 277031..278470 (-) 1440 WP_049519745.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55743.13 Da        Isoelectric Point: 9.2425

>NTDB_id=964592 NYE79_RS01535 WP_000759894.1 272504..274000(+) (amiC) [Streptococcus sp. FSL W8-0197]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQERAS
TMDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYSNLIDIDHPNKIQDPENPNLQRYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNINLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAVAGLIGLIISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=964592 NYE79_RS01535 WP_000759894.1 272504..274000(+) (amiC) [Streptococcus sp. FSL W8-0197]
ATGAAGAAATATATTTTTATGCGTGTACTGCGTTCATTGTTGTCTATTTTCTTGGTGACAACTTTGACTTACACAATTAT
TTATACGATGGTTCCTCGGAAATTGATTTTCAAGCAGGATACCAACTATAACAAGATTGCAACGACGCCGGACAAGCGGG
ATAATTATGAAAATACCGTTTATGAACGGATGGGCTATATCGAGTACTACGATACCAAGGAGTTGCAAGAAAGAGCGAGC
ACAATGGACTCATCTGTAACAGTGGATGCCAATGATACCAATAAGGCAATCTACGAAAAATACATCAACCAACTAGGAAA
TGGTTGGACACTTGGTGTGTTCTCAGAAAGTGGTCAATTCTATGCTACGCGTGAAATTCCAATTTTTGAACGTGTTTTCA
AATTCTATTCCAACTTGATTGATATTGATCATCCAAACAAGATTCAAGACCCTGAAAATCCAAACTTGCAACGTTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACAAAACATAAATACCTTTTGTATTTCAACAA
TCAATTCCCATTTGTACACCAAAACTTTGTGAACATTAACTTGGGTGATTCTTACCCAACTTATGCAAACACACCAGTGC
TTCAAGTTATCACACAAGGTCAGGGACAAACTAAGACATCAGAAGTTCAATTCCCTACAGGTAAAAAGACTTCATCTGTA
GATATTTACTCTCGTACTTACAAATCTCCAAGTCAAGCAGATGCGCGTGAAGTAGCCAACTATGGTAAAGACGATCCATA
TACAGCTACAGAAAGCAATTATCAATATCCTTCAATGATTGCAAGCTCAGCGGTTGCTGGTTTGATTGGTTTGATTATTT
CGTATGCGATTGCGATTCCACTTGGATCTGCTATGGCTCGCCACAAGAATACTTGGATTGATAGCTTCTCGACAGGTGCT
CTAACCTTCTTGCTTGCCCTTCCAACGATTGCCTTGGTTTATATCGTGCGCTTGATTGGATCATCTATCGGTCTGCCAGA
TTCATTTCCTATCTTGGGAGCAGGGGACTGGCGTTCATATGTCTTGCCAGCAGTCATTCTAGGTTTGCTGGGTGCACCAA
GTACAGCTATCTGGATTCGTCGTTACATGATCGACTTGCAATCTCAGGACTTCGTACGTTTTGCTCGTGCCAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCTGGTGCCGTAAT
CGGAGTTATCGGTGGTGCAACATTGACAGAAACGGTCTTCGCTTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTTA
AGGCATCAAACAACTCAATGGTAGTTGGTCTTGTCTTCATCTTCACATGTATTTCTATCTTCTCACTCTTTGTAGGTGAT
ATCTGGATGACCATGCTTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139PWX2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.707

100

0.767
  amiC Streptococcus thermophilus LMG 18311

76.104

100

0.761
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment