Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   NYE79_RS01065 Genome accession   NZ_CP150168
Coordinates   184920..185333 (+) Length   137 a.a.
NCBI ID   WP_070568123.1    Uniprot ID   A0A1E9G8J5
Organism   Streptococcus sp. FSL W8-0197     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 179920..190333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS01030 (NYE79_01030) - 181196..181561 (+) 366 WP_216728919.1 DUF1033 family protein -
  NYE79_RS01035 (NYE79_01035) comGA/cglA/cilD 181626..182567 (+) 942 WP_216728920.1 competence type IV pilus ATPase ComGA Machinery gene
  NYE79_RS01040 (NYE79_01040) comGB/cglB 182515..183531 (+) 1017 WP_216728921.1 competence type IV pilus assembly protein ComGB Machinery gene
  NYE79_RS01045 (NYE79_01045) comGC/cglC 183533..183856 (+) 324 WP_000735800.1 competence type IV pilus major pilin ComGC Machinery gene
  NYE79_RS01050 (NYE79_01050) comGD/cglD 183819..184253 (+) 435 WP_216728922.1 competence type IV pilus minor pilin ComGD Machinery gene
  NYE79_RS01055 (NYE79_01055) comGE/cglE 184216..184518 (+) 303 WP_200370534.1 competence type IV pilus minor pilin ComGE Machinery gene
  NYE79_RS01060 (NYE79_01060) comGF/cglF 184481..184942 (+) 462 WP_070568120.1 competence type IV pilus minor pilin ComGF Machinery gene
  NYE79_RS01065 (NYE79_01065) comGG/cglG 184920..185333 (+) 414 WP_070568123.1 competence type IV pilus minor pilin ComGG Machinery gene
  NYE79_RS01070 (NYE79_01070) - 185366..185956 (+) 591 WP_216728923.1 class I SAM-dependent methyltransferase -
  NYE79_RS01075 (NYE79_01075) comYH 186015..186968 (+) 954 WP_216728924.1 class I SAM-dependent methyltransferase Machinery gene
  NYE79_RS01080 (NYE79_01080) - 187019..188209 (+) 1191 WP_000167790.1 acetate kinase -
  NYE79_RS01085 (NYE79_01085) rnpA 188359..188730 (+) 372 WP_000748120.1 ribonuclease P protein component -
  NYE79_RS01090 (NYE79_01090) - 188705..189532 (+) 828 WP_196755722.1 membrane protein insertase YidC -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15782.31 Da        Isoelectric Point: 10.6146

>NTDB_id=964584 NYE79_RS01065 WP_070568123.1 184920..185333(+) (comGG/cglG) [Streptococcus sp. FSL W8-0197]
MWKKQKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHHKDFALNKEKLAAFAMAKRSKDKVEQESGERVFNLGKVRYQNTK
TGFTTSVRMNKGNYEFLFPPMKIQEKKTDKKEEVATDSSNQAGKKKSEEKPEKKDKS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=964584 NYE79_RS01065 WP_070568123.1 184920..185333(+) (comGG/cglG) [Streptococcus sp. FSL W8-0197]
GTGTGGAAAAAGCAAAAAGTTAAGGCAGGCGTTCTTTTATATGCAGTCACCATGGCAGCTATCTTTAGTCTGTTGTTGCA
GTTTTATTTGAATCGGCAAGTCGCCCATCACAAAGACTTTGCCCTAAACAAAGAAAAGCTGGCAGCTTTTGCCATGGCCA
AGCGCAGTAAAGATAAGGTTGAGCAAGAAAGTGGGGAACGAGTCTTCAACTTAGGAAAAGTCAGGTATCAAAATACGAAA
ACAGGTTTTACAACAAGTGTTCGTATGAATAAGGGCAACTATGAATTTCTCTTTCCTCCGATGAAAATCCAAGAAAAGAA
AACGGATAAAAAGGAAGAGGTAGCGACTGATTCAAGCAATCAAGCAGGGAAGAAAAAATCAGAAGAAAAGCCTGAAAAGA
AAGACAAATCCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E9G8J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

78.689

89.051

0.701
  comGG/cglG Streptococcus pneumoniae Rx1

79.487

85.401

0.679
  comGG/cglG Streptococcus pneumoniae D39

79.487

85.401

0.679
  comGG/cglG Streptococcus pneumoniae R6

79.487

85.401

0.679
  comGG/cglG Streptococcus pneumoniae TIGR4

79.487

85.401

0.679
  comGG/cglG Streptococcus mitis SK321

75.41

89.051

0.672

Multiple sequence alignment