Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHL49_RS07610 Genome accession   NZ_CP148103
Coordinates   1454445..1454909 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449445..1459909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS07590 kinA 1449911..1451731 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHL49_RS07595 dapX 1451742..1452923 (-) 1182 WP_003232415.1 aminotransferase A -
  WHL49_RS07600 - 1453125..1453286 (-) 162 WP_003245246.1 hypothetical protein -
  WHL49_RS07605 cheV 1453490..1454401 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHL49_RS07610 kre 1454445..1454909 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHL49_RS07615 ykuC 1455035..1456327 (-) 1293 WP_003245267.1 MFS transporter -
  WHL49_RS07620 ltdD 1456403..1456897 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHL49_RS07625 ppeE 1456954..1457814 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHL49_RS07630 fadH 1457957..1458721 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=950505 WHL49_RS07610 WP_003232406.1 1454445..1454909(-) (kre) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=950505 WHL49_RS07610 WP_003232406.1 1454445..1454909(-) (kre) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1