Detailed information NTG0949848

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: WAE38_RS11260
• Genome accession: NZ_CP147984
• Coordinates: 2240094..2241221 (+)
• Length: 375 a.a.
• NCBI ID: WP_338823983.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain H16SD2BY4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2235094..2246221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAE38_RS11230 (WAE38_11230)	-	2235207..2235482 (+)	276	WP_075630739.1	type II toxin-antitoxin system RelE/ParE family toxin	-
WAE38_RS11235 (WAE38_11235)	-	2235521..2235901 (+)	381	WP_075630738.1	helix-turn-helix transcriptional regulator	-
WAE38_RS11240 (WAE38_11240)	-	2236550..2237491 (-)	942	WP_021111453.1	hypothetical protein	-
WAE38_RS11245 (WAE38_11245)	rfaD	2237583..2238509 (-)	927	WP_160436381.1	ADP-glyceromanno-heptose 6-epimerase	-
WAE38_RS11250 (WAE38_11250)	def	2238521..2239033 (-)	513	WP_005712670.1	peptide deformylase	-
WAE38_RS11255 (WAE38_11255)	-	2239251..2240069 (+)	819	WP_021114360.1	Bro-N domain-containing protein	-
WAE38_RS11260 (WAE38_11260)	dprA	2240094..2241221 (+)	1128	WP_338823983.1	DNA-processing protein DprA	Machinery gene
WAE38_RS11265 (WAE38_11265)	-	2241274..2242110 (+)	837	WP_005712673.1	ABC transporter substrate-binding protein	-
WAE38_RS11270 (WAE38_11270)	-	2242110..2243096 (+)	987	WP_338823984.1	iron ABC transporter permease	-
WAE38_RS11275 (WAE38_11275)	-	2243096..2243884 (+)	789	WP_010787335.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41757.72 Da
• Isoelectric Point: 5.4055

>NTDB_id=949848 WAE38_RS11260 WP_338823983.1 2240094..2241221(+) (dprA) [Glaesserella parasuis strain H16SD2BY4]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQVVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENVEDILDAIAWQRQSVHIQPSLFDTKPKQAVKSDPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETTLIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=949848 WAE38_RS11260 WP_338823983.1 2240094..2241221(+) (dprA) [Glaesserella parasuis strain H16SD2BY4]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTCTTGCTGAAGCAGATCAGCACCGCTCCTCCAGTGCTTTTTGTGCGGGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCCATCGTTGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCTGGGCATTTTTCGGCGG
AATTAGTGAAACATCAGCTTGCTGTCACCAGTGGCTTAGCCATAGGCATAGATGGATTTTGCCATCAACGTGCGGTCAAT
GAAAACGGAATTACCATTGCGGTTTTGGGCAGTGGGCTAGACCAAGTCTATCCTGCCCGCCACAAAAAACTTGCGGAACA
AGTCGTTGATACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAAAATTTCCCTAGACGAA
ATCGCATCATCAGCGGATTATCTCTCGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGTTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCAAACTCAGTACAAAACCCTTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTGCTGGTTGAAAATGTTGAAGATATTTTAGATGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGACCCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCACATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

• DprA winged helix domain (DprA_WH) (313-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.6	100	0.976
dprA	Haemophilus influenzae Rd KW20	52.941	90.667	0.48
dprA	Vibrio campbellii strain DS40M4	47.185	99.467	0.469
dprA	Vibrio cholerae strain A1552	44.415	100	0.445
dprA	Legionella pneumophila strain ERS1305867	39.418	100	0.397