Detailed information NTG0948994

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: WDW95_RS06305
• Genome accession: NZ_CP147857
• Coordinates: 1267209..1268060 (-)
• Length: 283 a.a.
• NCBI ID: WP_368651331.1
• Uniprot ID: -
• Organism: Lactococcus raffinolactis strain APC3967
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1262209..1273060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDW95_RS06285	purB	1262961..1264253 (-)	1293	WP_096039219.1	adenylosuccinate lyase	-
WDW95_RS06290	purK	1264284..1265342 (-)	1059	WP_096824057.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
WDW95_RS06295	purE	1265335..1265829 (-)	495	WP_096039221.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
WDW95_RS06300	purD	1265822..1267075 (-)	1254	WP_061774797.1	phosphoribosylamine--glycine ligase	-
WDW95_RS06305	dprA	1267209..1268060 (-)	852	WP_368651331.1	DNA-processing protein DprA	Machinery gene
WDW95_RS06310	-	1268142..1269098 (-)	957	WP_061774799.1	ABC transporter permease	-
WDW95_RS06315	-	1269098..1270174 (-)	1077	WP_138491358.1	ABC transporter permease	-
WDW95_RS06320	-	1270177..1271691 (-)	1515	WP_368651332.1	ABC transporter ATP-binding protein	-
WDW95_RS06325	deoD	1271840..1272550 (-)	711	WP_368651333.1	purine-nucleoside phosphorylase	-

Sequence

Protein

• Length: 283 a.a.
• Molecular weight: 32099.14 Da
• Isoelectric Point: 8.4356

>NTDB_id=948994 WDW95_RS06305 WP_368651331.1 1267209..1268060(-) (dprA) [Lactococcus raffinolactis strain APC3967]
MQNFDIYRLKKAGMSNLMVYQFLTLVADSQERNPLVCLPAFIRQVKMKQSAHFWEKFRSFDIKAIREEFQKFPSFSIQDK
VYPEALREIYNPPVLLFYQGDLSLLHQTKLGFVGSRDCSQVGVASVQKIIKELQDRFVIVSGLARGIDTASHIAAMKNGG
KTIAVIGTGLDVNYPRENYQLQAYIAKHQLLLSEYGPDEKPLKYHFPERNRIIAGLSRGVLVTEAKLRSGSLITCERAME
EGRDVFAVPGNIIDGVSDGCHYLIQEGAKLIFHGRDILMEYDM

Nucleotide

• Length: 852 bp

>NTDB_id=948994 WDW95_RS06305 WP_368651331.1 1267209..1268060(-) (dprA) [Lactococcus raffinolactis strain APC3967]
ATGCAAAATTTCGATATCTATCGCTTAAAAAAAGCTGGCATGTCAAACTTAATGGTTTATCAGTTTTTAACCCTAGTTGC
AGACAGTCAAGAAAGAAACCCCTTGGTCTGTTTACCAGCCTTTATTCGACAAGTTAAGATGAAACAGTCAGCTCATTTTT
GGGAAAAATTCCGATCATTTGACATAAAAGCCATACGAGAGGAGTTTCAGAAATTTCCGTCTTTCTCAATTCAGGATAAG
GTCTATCCTGAAGCTTTGCGAGAAATTTATAATCCGCCCGTCTTACTTTTTTATCAGGGAGATTTGAGCTTGCTTCATCA
GACCAAACTGGGTTTTGTTGGCAGTCGAGATTGCAGTCAAGTAGGGGTTGCCAGTGTTCAGAAGATCATCAAAGAATTGC
AAGATCGCTTTGTGATTGTTAGTGGCTTAGCACGGGGCATTGATACAGCTAGTCATATTGCTGCTATGAAAAATGGAGGT
AAGACAATTGCTGTGATTGGAACAGGGTTAGATGTGAATTATCCACGAGAAAATTATCAACTGCAGGCTTATATCGCAAA
ACATCAGCTCCTTTTATCAGAATATGGGCCAGATGAAAAACCTTTGAAGTATCATTTTCCAGAGCGTAATCGAATTATTG
CAGGTCTATCTCGTGGTGTATTAGTGACAGAAGCCAAGCTCCGCTCAGGTAGTTTGATTACCTGTGAGCGGGCTATGGAA
GAGGGGAGAGATGTGTTTGCCGTTCCAGGTAATATCATAGATGGGGTGTCAGATGGCTGCCACTATTTGATTCAGGAAGG
TGCAAAACTGATTTTCCATGGTCGAGATATATTAATGGAGTACGACATGTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	62.544	100	0.625
dprA	Lactococcus lactis subsp. cremoris KW2	60.142	99.293	0.597
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	57.801	99.647	0.576
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.801	99.647	0.576
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.801	99.647	0.576
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.801	99.647	0.576
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.801	99.647	0.576
dprA/cilB/dalA	Streptococcus mitis SK321	57.447	99.647	0.572
dprA	Bacillus subtilis subsp. subtilis str. 168	49.321	78.092	0.385
dprA	Legionella pneumophila strain ERS1305867	40.613	92.226	0.375
dprA	Staphylococcus aureus MW2	35.664	100	0.36