Detailed information NTG0940379

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: V6U63_RS05410
• Genome accession: NZ_CP145861
• Coordinates: 1122181..1123020 (-)
• Length: 279 a.a.
• NCBI ID: WP_410534799.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1117181..1128020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U63_RS05395 (V6U63_05390)	-	1118279..1119007 (-)	729	WP_070476060.1	lantibiotic ABC transporter permease	-
V6U63_RS05400 (V6U63_05395)	-	1119012..1119686 (-)	675	WP_021144080.1	ATP-binding cassette domain-containing protein	-
V6U63_RS05405 (V6U63_05400)	topA	1119869..1122013 (-)	2145	WP_410534797.1	type I DNA topoisomerase	-
V6U63_RS05410 (V6U63_05405)	dprA	1122181..1123020 (-)	840	WP_410534799.1	DNA-processing protein DprA	Machinery gene
V6U63_RS05415 (V6U63_05410)	-	1123087..1124007 (-)	921	WP_195188000.1	ROK family protein	-
V6U63_RS05420 (V6U63_05415)	-	1124014..1124784 (-)	771	WP_195188001.1	ribonuclease HII	-
V6U63_RS05425 (V6U63_05420)	ylqF	1124771..1125625 (-)	855	WP_410534801.1	ribosome biogenesis GTPase YlqF	-
V6U63_RS05430 (V6U63_05425)	-	1125754..1126443 (-)	690	WP_002883906.1	XRE family transcriptional regulator	-
V6U63_RS05435 (V6U63_05430)	-	1126538..1127053 (-)	516	WP_270617084.1	transcription repressor NadR	-
V6U63_RS05440 (V6U63_05435)	-	1127076..1127603 (-)	528	WP_002883896.1	ECF transporter S component	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31249.19 Da
• Isoelectric Point: 8.6585

>NTDB_id=940379 V6U63_RS05410 WP_410534799.1 1122181..1123020(-) (dprA) [Streptococcus salivarius strain KSS3]
MNNFELFKLKAAGLTNLNILNILDYQKTQDRKLSLRDMAVVSKSKNAVLFMEKYKSLDIKQLKEQFDRFPTLSIFDKEYP
IELKHAYNPPVLLYYQGNLDLLSKPKLAVVGARKCSETGKQSVRKIVSELGNHFTIVSGLARGIDTCAHMEALKNKGNTI
AVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFAIPGNILDGKSDGCHHLIQEGAKCITTGFDILSEFS

Nucleotide

• Length: 840 bp

>NTDB_id=940379 V6U63_RS05410 WP_410534799.1 1122181..1123020(-) (dprA) [Streptococcus salivarius strain KSS3]
ATGAATAATTTTGAACTTTTTAAACTTAAAGCCGCTGGGTTGACGAATTTGAATATCTTAAATATTTTGGACTATCAAAA
GACTCAAGATAGAAAATTGAGTTTACGTGATATGGCAGTGGTATCCAAGTCTAAAAATGCCGTTCTTTTTATGGAAAAGT
ATAAGAGTTTAGATATTAAGCAACTCAAAGAACAATTCGACCGTTTTCCTACGTTATCGATTTTTGATAAAGAATATCCC
ATTGAGCTGAAGCATGCCTATAATCCTCCTGTTCTCCTTTATTATCAGGGGAATCTTGATTTACTGAGTAAACCAAAGCT
AGCAGTTGTTGGGGCAAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGCAAAATTGTTAGTGAACTTGGTAATCACT
TTACTATTGTGAGTGGATTGGCGCGTGGGATTGATACTTGTGCGCATATGGAGGCCTTGAAAAATAAGGGGAACACCATT
GCAGTTATCGGGACCGGACTTGATGTTTATTATCCTAAAGAAAATAAAGCTTTGCAGGACTATATGGCCAAAAATCATTT
AGTTCTTACAGAATATGGACCGGGTGAACAGCCTCTCAAGTACCACTTTCCTGAACGCAATCGGATTATTTCTGGATTGT
GTCAAGGAGTTATGGTTGTAGAAGCTAAGCTTCGCTCAGGAAGTCTGATTACTTGTGAGCGTGCCATGGAAGAAGGTAGA
GATGTTTTTGCTATTCCAGGAAATATTTTAGATGGAAAGTCAGACGGATGTCATCACTTAATTCAAGAGGGTGCAAAGTG
CATCACGACAGGGTTTGACATCCTTTCAGAGTTTTCTTGA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus mitis SK321	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	40.541	92.832	0.376
dprA	Staphylococcus aureus N315	41.296	88.53	0.366
dprA	Bacillus subtilis subsp. subtilis str. 168	48.095	75.269	0.362