Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V6C87_RS01470 Genome accession   NZ_CP145214
Coordinates   270585..271250 (+) Length   221 a.a.
NCBI ID   WP_047796788.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. urealyticus strain Sc1365754     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 265585..276250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6C87_RS01445 (V6C87_01450) - 265675..266301 (-) 627 WP_098905364.1 FMN-dependent NADH-azoreductase -
  V6C87_RS01450 (V6C87_01455) - 266571..266672 (+) 102 WP_016898541.1 SE2200 family small protein -
  V6C87_RS01455 (V6C87_01460) - 266856..268397 (+) 1542 WP_367008808.1 NAD(P)H-binding protein -
  V6C87_RS01460 (V6C87_01465) - 268591..270075 (-) 1485 WP_002436173.1 alkaline phosphatase -
  V6C87_RS01465 (V6C87_01470) - 270402..270554 (+) 153 WP_192940984.1 hypothetical protein -
  V6C87_RS01470 (V6C87_01475) braR 270585..271250 (+) 666 WP_047796788.1 response regulator transcription factor Regulator
  V6C87_RS01475 (V6C87_01480) braS 271256..272152 (+) 897 WP_047796787.1 sensor histidine kinase Regulator
  V6C87_RS01480 (V6C87_01485) - 272262..273011 (+) 750 WP_047796786.1 ABC transporter ATP-binding protein -
  V6C87_RS01485 (V6C87_01490) - 273205..275028 (+) 1824 WP_367008810.1 ABC transporter permease -
  V6C87_RS01490 (V6C87_01495) - 275255..276127 (+) 873 WP_367008812.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25504.30 Da        Isoelectric Point: 4.2609

>NTDB_id=937779 V6C87_RS01470 WP_047796788.1 270585..271250(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365754]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVNGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=937779 V6C87_RS01470 WP_047796788.1 270585..271250(+) (braR) [Staphylococcus capitis subsp. urealyticus strain Sc1365754]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAACT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCGAGA
ACTGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCGTTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAATGGTTGCA
AGTTGATTCTTGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGCTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATCGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCCATAGGCGTTGATGATTTTATTGAAACGA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

82.805

100

0.828