Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB339_RS06890 Genome accession   NZ_CP167023
Coordinates   1313379..1313561 (-) Length   60 a.a.
NCBI ID   WP_011054793.1    Uniprot ID   A0A0H2UWN8
Organism   Streptococcus pyogenes strain Isolate 3     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1308379..1318561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB339_RS06875 (ACB339_06870) rocA 1309816..1311170 (-) 1355 Protein_1311 transcriptional regulator RocA -
  ACB339_RS06880 (ACB339_06875) rlmD 1311835..1313190 (-) 1356 WP_002991789.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ACB339_RS06885 (ACB339_06880) - 1313174..1313299 (-) 126 WP_272916705.1 hypothetical protein -
  ACB339_RS06890 (ACB339_06885) prx 1313379..1313561 (-) 183 WP_011054793.1 hypothetical protein Regulator
  ACB339_RS06895 (ACB339_06890) speA 1313781..1314536 (+) 756 WP_011054794.1 streptococcal pyrogenic exotoxin SpeA -
  ACB339_RS06900 (ACB339_06895) - 1314658..1315317 (-) 660 WP_009880240.1 hypothetical protein -
  ACB339_RS06905 (ACB339_06900) - 1315317..1315538 (-) 222 WP_009880241.1 hypothetical protein -
  ACB339_RS06910 (ACB339_06905) - 1315548..1316321 (-) 774 WP_011054795.1 hypothetical protein -
  ACB339_RS06915 (ACB339_06910) - 1316332..1316935 (-) 604 Protein_1319 hypothetical protein -
  ACB339_RS06920 (ACB339_06915) - 1316947..1317711 (-) 765 WP_011054797.1 CHAP domain-containing protein -
  ACB339_RS06925 (ACB339_06920) - 1317713..1318045 (-) 333 WP_011054798.1 phage holin -
  ACB339_RS06930 (ACB339_06925) - 1318381..1318503 (-) 123 WP_015055953.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7014.08 Da        Isoelectric Point: 4.3313

>NTDB_id=931688 ACB339_RS06890 WP_011054793.1 1313379..1313561(-) (prx) [Streptococcus pyogenes strain Isolate 3]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=931688 ACB339_RS06890 WP_011054793.1 1313379..1313561(-) (prx) [Streptococcus pyogenes strain Isolate 3]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAAGTTGTGACGGTAGAGAGAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 6CKA
  PDB 7N10
  PDB 7N1N
  PDB 8VSR

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

75

100

0.75
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533