Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB339_RS05000 Genome accession   NZ_CP167023
Coordinates   977614..977796 (-) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 3     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 972614..982796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB339_RS04985 (ACB339_04980) slc2 972923..974842 (-) 1920 WP_371484798.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  ACB339_RS04990 (ACB339_04985) lepA 975029..976861 (-) 1833 WP_011054451.1 translation elongation factor 4 -
  ACB339_RS04995 (ACB339_04990) - 976985..977391 (-) 407 Protein_936 nucleoside-diphosphate kinase -
  ACB339_RS05000 (ACB339_04995) prx 977614..977796 (-) 183 WP_029714017.1 hypothetical protein Regulator
  ACB339_RS05005 (ACB339_05000) - 977995..978204 (-) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  ACB339_RS05010 (ACB339_05005) - 978358..978504 (+) 147 WP_011054449.1 hypothetical protein -
  ACB339_RS05015 (ACB339_05010) - 978645..978896 (+) 252 WP_011054448.1 hypothetical protein -
  ACB339_RS05020 (ACB339_05015) - 979160..979399 (+) 240 WP_011054447.1 hypothetical protein -
  ACB339_RS05025 (ACB339_05020) - 979457..979813 (+) 357 WP_011054446.1 hypothetical protein -
  ACB339_RS05030 (ACB339_05025) - 979929..981137 (-) 1209 WP_136301353.1 glucosaminidase domain-containing protein -
  ACB339_RS05035 (ACB339_05030) - 981253..981480 (-) 228 WP_011054444.1 phage holin -
  ACB339_RS05040 (ACB339_05035) - 981477..981752 (-) 276 WP_002987582.1 hypothetical protein -
  ACB339_RS05045 (ACB339_05040) - 981762..982379 (-) 618 WP_010922094.1 DUF1366 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=931671 ACB339_RS05000 WP_029714017.1 977614..977796(-) (prx) [Streptococcus pyogenes strain Isolate 3]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=931671 ACB339_RS05000 WP_029714017.1 977614..977796(-) (prx) [Streptococcus pyogenes strain Isolate 3]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55