Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   VP472_RS01775 Genome accession   NZ_CP143632
Coordinates   330598..330996 (-) Length   132 a.a.
NCBI ID   WP_077721770.1    Uniprot ID   -
Organism   Bacillus sp. MT(2024)     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 325598..335996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VP472_RS01745 (VP472_01745) - 326612..326770 (-) 159 Protein_303 molybdopterin dinucleotide binding domain-containing protein -
  VP472_RS01750 (VP472_01750) - 326885..328087 (+) 1203 WP_146276088.1 GTP-binding protein -
  VP472_RS01755 (VP472_01755) - 328152..329288 (+) 1137 WP_146276090.1 zinc-dependent alcohol dehydrogenase -
  VP472_RS01760 (VP472_01760) - 329303..329737 (+) 435 WP_021494203.1 RDD family protein -
  VP472_RS01765 (VP472_01765) - 329810..330130 (+) 321 WP_015388719.1 YckD family protein -
  VP472_RS01770 (VP472_01770) - 330350..330579 (+) 230 Protein_308 family 1 glycosylhydrolase -
  VP472_RS01775 (VP472_01775) nin/comJ 330598..330996 (-) 399 WP_077721770.1 competence protein ComJ Regulator
  VP472_RS01780 (VP472_01780) nucA/comI 331018..331455 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  VP472_RS01785 (VP472_01785) hxlB 331814..332371 (-) 558 WP_077721772.1 6-phospho-3-hexuloisomerase -
  VP472_RS01790 (VP472_01790) hxlA 332368..333003 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  VP472_RS01795 (VP472_01795) - 333235..333597 (+) 363 WP_016936795.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15045.02 Da        Isoelectric Point: 4.6564

>NTDB_id=930002 VP472_RS01775 WP_077721770.1 330598..330996(-) (nin/comJ) [Bacillus sp. MT(2024)]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAETDGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=930002 VP472_RS01775 WP_077721770.1 330598..330996(-) (nin/comJ) [Bacillus sp. MT(2024)]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAACTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGGTACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.969

97.727

0.742