Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB354_RS03320 Genome accession   NZ_CP167004
Coordinates   599597..599779 (+) Length   60 a.a.
NCBI ID   WP_011018104.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 28     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 594597..604779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB354_RS03285 (ACB354_03285) - 594885..595502 (+) 618 WP_011018111.1 DUF1366 domain-containing protein -
  ACB354_RS03290 (ACB354_03290) - 595513..595812 (+) 300 WP_011184797.1 hypothetical protein -
  ACB354_RS03295 (ACB354_03295) - 595809..595994 (+) 186 WP_011184796.1 holin -
  ACB354_RS03300 (ACB354_03300) - 596107..597312 (+) 1206 WP_011184795.1 glucosaminidase domain-containing protein -
  ACB354_RS03305 (ACB354_03305) - 597461..597625 (+) 165 WP_021340366.1 hypothetical protein -
  ACB354_RS03310 (ACB354_03310) - 597658..598218 (+) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  ACB354_RS03315 (ACB354_03315) sda 598359..599357 (-) 999 WP_032463908.1 streptodornase A -
  ACB354_RS03320 (ACB354_03320) prx 599597..599779 (+) 183 WP_011018104.1 hypothetical protein Regulator
  ACB354_RS03325 (ACB354_03325) rlmD 599970..601325 (+) 1356 WP_011184793.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ACB354_RS03330 (ACB354_03330) rocA 601991..603346 (+) 1356 WP_371399121.1 transcriptional regulator RocA -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6935.81 Da        Isoelectric Point: 3.9417

>NTDB_id=929966 ACB354_RS03320 WP_011018104.1 599597..599779(+) (prx) [Streptococcus pyogenes strain Isolate 28]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEARNGEVVTEEVVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=929966 ACB354_RS03320 WP_011018104.1 599597..599779(+) (prx) [Streptococcus pyogenes strain Isolate 28]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGCGAGAAATGGAGAAGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

93.023

71.667

0.667