Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB350_RS06005 Genome accession   NZ_CP166999
Coordinates   1172120..1172302 (-) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 34     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1167120..1177302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB350_RS05985 (ACB350_05985) - 1167559..1168254 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  ACB350_RS05990 (ACB350_05990) - 1168493..1169428 (+) 936 WP_021299339.1 dihydroorotate oxidase -
  ACB350_RS05995 (ACB350_05995) - 1169483..1169656 (-) 174 WP_002989134.1 hypothetical protein -
  ACB350_RS06000 (ACB350_06000) - 1169728..1171590 (-) 1863 WP_011284945.1 heavy metal translocating P-type ATPase -
  ACB350_RS06005 (ACB350_06005) prx 1172120..1172302 (-) 183 WP_011017964.1 hypothetical protein Regulator
  ACB350_RS06010 (ACB350_06010) entC3 1172415..1173197 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  ACB350_RS06015 (ACB350_06015) - 1173445..1174569 (-) 1125 WP_002988467.1 Fic family protein -
  ACB350_RS06020 (ACB350_06020) - 1174705..1175922 (-) 1218 WP_032460576.1 peptidoglycan amidohydrolase family protein -
  ACB350_RS06025 (ACB350_06025) - 1176041..1176268 (-) 228 WP_003058873.1 phage holin -
  ACB350_RS06030 (ACB350_06030) - 1176265..1176540 (-) 276 WP_076634525.1 hypothetical protein -
  ACB350_RS06035 (ACB350_06035) - 1176552..1177184 (-) 633 WP_011054443.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=929500 ACB350_RS06005 WP_011017964.1 1172120..1172302(-) (prx) [Streptococcus pyogenes strain Isolate 34]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=929500 ACB350_RS06005 WP_011017964.1 1172120..1172302(-) (prx) [Streptococcus pyogenes strain Isolate 34]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55