Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | U6151_RS21765 | Genome accession | NZ_CP143257 |
| Coordinates | 4555225..4555695 (-) | Length | 156 a.a. |
| NCBI ID | WP_052258328.1 | Uniprot ID | A0A2R2IWU9 |
| Organism | Chromobacterium subtsugae isolate delta-vioS | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4550225..4560695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U6151_RS21750 (U6151_21760) | rpoH | 4550341..4551204 (+) | 864 | WP_043579577.1 | RNA polymerase sigma factor RpoH | - |
| U6151_RS21755 (U6151_21765) | - | 4551404..4553191 (-) | 1788 | WP_043579580.1 | PglL family O-oligosaccharyltransferase | - |
| U6151_RS21760 (U6151_21770) | - | 4553286..4555130 (-) | 1845 | WP_043579582.1 | PglL family O-oligosaccharyltransferase | - |
| U6151_RS21765 (U6151_21775) | pilA | 4555225..4555695 (-) | 471 | WP_052258328.1 | pilin | Machinery gene |
| U6151_RS21770 (U6151_21780) | - | 4555787..4556263 (-) | 477 | WP_043579592.1 | pilin | - |
| U6151_RS21775 (U6151_21785) | - | 4556532..4557881 (+) | 1350 | WP_043579594.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| U6151_RS21780 (U6151_21790) | - | 4557964..4559463 (+) | 1500 | WP_043579595.1 | hypothetical protein | - |
| U6151_RS21785 (U6151_21795) | proB | 4559539..4560657 (+) | 1119 | WP_043579597.1 | glutamate 5-kinase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 16138.22 Da Isoelectric Point: 8.9435
>NTDB_id=928334 U6151_RS21765 WP_052258328.1 4555225..4555695(-) (pilA) [Chromobacterium subtsugae isolate delta-vioS]
MRNRTTQRGFTLIELMIVVAIVGILAAIAIPAYQDYAKRSRVAEGLALADAAKTAVAEYYASKSAFASSTPYNSAYGLST
ASSITGNAVNSVSVLASGVIQLTYNNTVSSGAQLDLVPSVTSGSVTWVCTYTGTGGGTTAIGTQLQANWVPTNCRQ
MRNRTTQRGFTLIELMIVVAIVGILAAIAIPAYQDYAKRSRVAEGLALADAAKTAVAEYYASKSAFASSTPYNSAYGLST
ASSITGNAVNSVSVLASGVIQLTYNNTVSSGAQLDLVPSVTSGSVTWVCTYTGTGGGTTAIGTQLQANWVPTNCRQ
Nucleotide
Download Length: 471 bp
>NTDB_id=928334 U6151_RS21765 WP_052258328.1 4555225..4555695(-) (pilA) [Chromobacterium subtsugae isolate delta-vioS]
ATGCGGAACAGAACGACGCAGCGCGGCTTTACCCTGATAGAGCTGATGATAGTGGTGGCGATAGTCGGCATCCTGGCCGC
CATCGCCATCCCGGCCTACCAGGACTACGCCAAGCGGTCGCGGGTGGCCGAGGGGCTGGCGCTGGCCGACGCCGCCAAGA
CCGCGGTGGCGGAGTACTACGCCAGCAAAAGCGCGTTCGCCAGCTCCACGCCGTACAACAGCGCGTACGGGCTGTCGACG
GCGTCGTCGATCACCGGCAACGCGGTGAACAGCGTGTCGGTGCTGGCCAGCGGCGTGATCCAACTGACCTACAACAACAC
GGTCTCCAGCGGCGCGCAGCTGGATCTGGTGCCCTCGGTCACCTCGGGTTCGGTTACCTGGGTTTGCACCTATACCGGCA
CCGGCGGCGGCACCACGGCCATCGGCACGCAGTTGCAGGCCAACTGGGTGCCGACCAACTGCCGGCAGTAG
ATGCGGAACAGAACGACGCAGCGCGGCTTTACCCTGATAGAGCTGATGATAGTGGTGGCGATAGTCGGCATCCTGGCCGC
CATCGCCATCCCGGCCTACCAGGACTACGCCAAGCGGTCGCGGGTGGCCGAGGGGCTGGCGCTGGCCGACGCCGCCAAGA
CCGCGGTGGCGGAGTACTACGCCAGCAAAAGCGCGTTCGCCAGCTCCACGCCGTACAACAGCGCGTACGGGCTGTCGACG
GCGTCGTCGATCACCGGCAACGCGGTGAACAGCGTGTCGGTGCTGGCCAGCGGCGTGATCCAACTGACCTACAACAACAC
GGTCTCCAGCGGCGCGCAGCTGGATCTGGTGCCCTCGGTCACCTCGGGTTCGGTTACCTGGGTTTGCACCTATACCGGCA
CCGGCGGCGGCACCACGGCCATCGGCACGCAGTTGCAGGCCAACTGGGTGCCGACCAACTGCCGGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
42.135 |
100 |
0.481 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.333 |
96.154 |
0.455 |
| pilA2 | Legionella pneumophila str. Paris |
47.333 |
96.154 |
0.455 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.458 |
100 |
0.449 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
42.236 |
100 |
0.436 |
| comP | Acinetobacter baylyi ADP1 |
41.935 |
99.359 |
0.417 |
| pilE | Neisseria gonorrhoeae MS11 |
39.264 |
100 |
0.41 |