Detailed information NTG0928137

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB8O64_RS05525
• Genome accession: NZ_CP166299
• Coordinates: 1231145..1231780 (+)
• Length: 211 a.a.
• NCBI ID: WP_370418139.1
• Uniprot ID: -
• Organism: Streptomyces sp. QH1-20
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1226145..1236780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O64_RS05500 (AB8O64_05505)	-	1227319..1227630 (-)	312	WP_370418136.1	urease subunit beta	-
AB8O64_RS05505 (AB8O64_05510)	-	1227648..1227950 (-)	303	WP_130876556.1	urease subunit gamma	-
AB8O64_RS05510 (AB8O64_05515)	-	1228148..1228447 (-)	300	WP_356458465.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
AB8O64_RS05515 (AB8O64_05520)	-	1228623..1229897 (-)	1275	WP_370418137.1	phosphatase PAP2 family protein	-
AB8O64_RS05520 (AB8O64_05525)	-	1230196..1230945 (-)	750	WP_370418138.1	dienelactone hydrolase family protein	-
AB8O64_RS05525 (AB8O64_05530)	clpP	1231145..1231780 (+)	636	WP_370418139.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB8O64_RS05530 (AB8O64_05535)	-	1231787..1232095 (+)	309	WP_362215410.1	hypothetical protein	-
AB8O64_RS05535 (AB8O64_05540)	-	1232605..1233075 (+)	471	WP_356458458.1	C40 family peptidase	-
AB8O64_RS05540 (AB8O64_05545)	-	1233434..1233862 (-)	429	WP_130876563.1	ATP-binding protein	-
AB8O64_RS05545 (AB8O64_05550)	-	1234128..1235006 (+)	879	WP_370418140.1	helix-turn-helix domain-containing protein	-
AB8O64_RS05550 (AB8O64_05555)	-	1235016..1235291 (+)	276	WP_370418141.1	DUF397 domain-containing protein	-
AB8O64_RS05555 (AB8O64_05560)	-	1235295..1236464 (-)	1170	WP_370418142.1	8-amino-7-oxononanoate synthase	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22951.00 Da
• Isoelectric Point: 5.6788

>NTDB_id=928137 AB8O64_RS05525 WP_370418139.1 1231145..1231780(+) (clpP) [Streptomyces sp. QH1-20]
MHRPTARYVLPEFTERTSTGARTTDPYSKLLSERIVFLGTQIDDTCASDVIAQFMYLEHADPERDISLYINSPGGSFSAM
CAIYDTMRYIGCDVETICLGQAASSAAVLLTAGTPGKRLALPNARVLIHQPSLGEPVQGQLSDLEIQAGEMSRRRDTLTG
MLVRHTGQSVERVARDIERDTVFDAETAVAYGLVDRLTSSRKGPGAPLGAR

Nucleotide

• Length: 636 bp

>NTDB_id=928137 AB8O64_RS05525 WP_370418139.1 1231145..1231780(+) (clpP) [Streptomyces sp. QH1-20]
ATGCACCGACCCACGGCCCGCTATGTCCTGCCCGAGTTCACGGAGCGCACGAGCACCGGCGCCCGCACGACGGACCCGTA
CTCCAAGCTGCTGTCCGAGCGCATCGTCTTTCTGGGCACGCAGATCGACGACACCTGTGCCAGCGATGTGATCGCGCAGT
TCATGTACCTCGAACACGCGGATCCCGAGCGGGACATCTCCCTCTACATCAATTCCCCCGGCGGCTCCTTCTCCGCCATG
TGCGCCATCTACGACACGATGCGCTACATCGGCTGCGACGTGGAGACGATCTGCCTGGGCCAGGCCGCCTCGTCCGCCGC
CGTGCTGCTCACCGCCGGCACCCCGGGCAAGCGACTGGCGCTGCCGAACGCGCGCGTCCTCATCCACCAGCCCTCCCTCG
GCGAACCGGTCCAGGGTCAGCTCTCCGATCTGGAGATCCAGGCGGGGGAGATGTCGCGCAGGCGGGACACGCTGACGGGG
ATGCTCGTGCGGCACACGGGGCAGAGCGTGGAGCGGGTCGCCCGGGACATCGAGCGGGACACCGTCTTCGACGCCGAGAC
CGCGGTGGCGTACGGGCTGGTCGACCGGCTCACCTCGAGCCGCAAGGGCCCGGGCGCGCCGCTCGGCGCGAGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.691	90.521	0.441
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.404	89.1	0.431
clpP	Streptococcus pneumoniae Rx1	42.487	91.469	0.389
clpP	Streptococcus pneumoniae D39	42.487	91.469	0.389
clpP	Streptococcus pneumoniae R6	42.487	91.469	0.389
clpP	Streptococcus pneumoniae TIGR4	42.487	91.469	0.389
clpP	Streptococcus thermophilus LMG 18311	41.237	91.943	0.379
clpP	Streptococcus thermophilus LMD-9	41.237	91.943	0.379
clpP	Streptococcus pyogenes JRS4	41.237	91.943	0.379
clpP	Streptococcus pyogenes MGAS315	41.237	91.943	0.379
clpP	Streptococcus mutans UA159	41.237	91.943	0.379
clpP	Lactococcus lactis subsp. cremoris KW2	40.722	91.943	0.374
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	40.722	91.943	0.374