Detailed information NTG0926560

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB5J89_RS36215
• Genome accession: NZ_CP163523
• Coordinates: 8121247..8121882 (-)
• Length: 211 a.a.
• NCBI ID: WP_221910352.1
• Uniprot ID: -
• Organism: Streptomyces sp. cg2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 8116247..8126882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J89_RS36190 (AB5J89_36190)	bioB	8116571..8117731 (-)	1161	WP_369360307.1	biotin synthase BioB	-
AB5J89_RS36195 (AB5J89_36195)	-	8117959..8119200 (+)	1242	WP_369360308.1	8-amino-7-oxononanoate synthase	-
AB5J89_RS36200 (AB5J89_36200)	-	8119472..8119918 (+)	447	WP_221910349.1	ATP-binding protein	-
AB5J89_RS36205 (AB5J89_36205)	-	8120011..8120505 (-)	495	WP_221910350.1	C40 family peptidase	-
AB5J89_RS36210 (AB5J89_36210)	-	8120923..8121240 (-)	318	WP_221910351.1	hypothetical protein	-
AB5J89_RS36215 (AB5J89_36215)	clpP	8121247..8121882 (-)	636	WP_221910352.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J89_RS36220 (AB5J89_36220)	-	8121941..8122255 (+)	315	WP_221910353.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
AB5J89_RS36225 (AB5J89_36225)	-	8122308..8123255 (-)	948	WP_221910354.1	M28 family metallopeptidase	-
AB5J89_RS36230 (AB5J89_36230)	-	8123790..8124092 (+)	303	WP_352300253.1	urease subunit gamma	-
AB5J89_RS36235 (AB5J89_36235)	-	8124110..8124415 (+)	306	Protein_7154	urease subunit beta	-
AB5J89_RS36240 (AB5J89_36240)	-	8124504..8126225 (+)	1722	WP_221910357.1	urease subunit alpha	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22823.84 Da
• Isoelectric Point: 5.0558

>NTDB_id=926560 AB5J89_RS36215 WP_221910352.1 8121247..8121882(-) (clpP) [Streptomyces sp. cg2]
MLPPSARYVLPEFTEHTSYGSRTLDPYSKLLSERIVFLGTAIDDASANDVMAQFVHLEHAAPGQDISLYINSPGGSFTAM
CAIYDTMRFVTCDVETVCLGRAASAAAVLLAAGTPGKRLALPHARVMIHQPAFGETAQGQTSDLQIQAEELLRTRAKLEE
MLAEHTGQPRERIAADIERDTFFDVAAAQEYGLIDGPTLGRKRSALQSAGQ

Nucleotide

• Length: 636 bp

>NTDB_id=926560 AB5J89_RS36215 WP_221910352.1 8121247..8121882(-) (clpP) [Streptomyces sp. cg2]
ATGCTGCCGCCGTCGGCTCGCTACGTCCTGCCGGAGTTCACCGAGCACACCAGCTACGGGAGCCGGACCCTGGACCCGTA
CTCCAAGCTGCTCAGCGAACGGATCGTCTTCCTGGGCACGGCCATCGACGACGCCTCCGCCAACGACGTGATGGCGCAGT
TCGTCCACCTCGAACACGCCGCGCCGGGCCAGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCGTTCACCGCGATG
TGCGCGATCTACGACACGATGCGCTTCGTCACCTGCGACGTGGAGACCGTCTGCCTGGGCCGGGCGGCGTCGGCGGCCGC
GGTCCTGCTGGCCGCCGGCACCCCCGGCAAGCGCCTGGCGCTCCCGCACGCGCGGGTGATGATCCATCAGCCCGCCTTCG
GCGAAACCGCCCAGGGCCAGACCAGCGACCTGCAGATCCAGGCCGAGGAGCTGCTGCGCACCCGCGCCAAGCTGGAGGAG
ATGCTCGCCGAGCACACCGGGCAGCCCCGGGAGCGGATCGCCGCGGACATCGAGCGGGACACCTTCTTCGACGTGGCCGC
CGCCCAGGAGTACGGCCTGATCGACGGCCCGACCCTCGGCCGGAAGCGCTCCGCCCTCCAGTCCGCGGGGCAGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.941	88.626	0.469
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.925	88.152	0.431
clpP	Streptococcus pneumoniae D39	45.455	88.626	0.403
clpP	Streptococcus pneumoniae Rx1	45.455	88.626	0.403
clpP	Streptococcus pneumoniae R6	45.455	88.626	0.403
clpP	Streptococcus pneumoniae TIGR4	45.455	88.626	0.403
clpP	Streptococcus thermophilus LMG 18311	44.92	88.626	0.398
clpP	Streptococcus thermophilus LMD-9	44.92	88.626	0.398
clpP	Streptococcus pyogenes JRS4	43.85	88.626	0.389
clpP	Streptococcus mutans UA159	43.85	88.626	0.389
clpP	Streptococcus pyogenes MGAS315	43.85	88.626	0.389
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.085	89.1	0.384
clpP	Lactococcus lactis subsp. cremoris KW2	43.085	89.1	0.384