Detailed information NTG0925122

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: VKP38_RS07465
• Genome accession: NZ_CP142352
• Coordinates: 1487976..1488566 (-)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain 2907-97
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1482976..1493566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP38_RS07430 (VKP38_07430)	-	1483156..1483548 (-)	393	WP_002985833.1	DUF5684 domain-containing protein	-
VKP38_RS07435 (VKP38_07435)	rsmI	1483575..1484438 (-)	864	WP_021733048.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
VKP38_RS07440 (VKP38_07440)	yabA	1484443..1484766 (-)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
VKP38_RS07445 (VKP38_07445)	-	1485171..1485410 (-)	240	WP_032460031.1	PSP1 C-terminal domain-containing protein	-
VKP38_RS07450 (VKP38_07450)	-	1485429..1486304 (-)	876	WP_011528291.1	DNA polymerase III subunit delta'	-
VKP38_RS07455 (VKP38_07455)	tmk	1486322..1486957 (-)	636	WP_032464192.1	dTMP kinase	-
VKP38_RS07460 (VKP38_07460)	-	1487206..1487481 (-)	276	WP_002985847.1	YlbG family protein	-
VKP38_RS07465 (VKP38_07465)	clpP	1487976..1488566 (-)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
VKP38_RS07470 (VKP38_07470)	upp	1488790..1489419 (-)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
VKP38_RS07475 (VKP38_07475)	-	1489587..1491221 (-)	1635	WP_136097761.1	polysaccharide biosynthesis protein	-
VKP38_RS07480 (VKP38_07480)	-	1491309..1492754 (+)	1446	WP_063629352.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=925122 VKP38_RS07465 WP_002985850.1 1487976..1488566(-) (clpP) [Streptococcus pyogenes strain 2907-97]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=925122 VKP38_RS07465 WP_002985850.1 1487976..1488566(-) (clpP) [Streptococcus pyogenes strain 2907-97]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561