Detailed information NTG0092506

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: Llc71_RS06890
• Genome accession: NZ_AP025520
• Coordinates: 1381196..1382044 (-)
• Length: 282 a.a.
• NCBI ID: WP_248536502.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain 7-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1376196..1387044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Llc71_RS06875 (Llc71_13680)	xerS	1376266..1377336 (+)	1071	WP_011835149.1	tyrosine recombinase XerS	-
Llc71_RS06880 (Llc71_13690)	trmFO	1377386..1378732 (-)	1347	WP_046124917.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
Llc71_RS06885 (Llc71_13700)	topA	1378804..1380930 (-)	2127	WP_046124918.1	type I DNA topoisomerase	-
Llc71_RS06890 (Llc71_13710)	dprA	1381196..1382044 (-)	849	WP_248536502.1	DNA-processing protein DprA	Machinery gene
Llc71_RS06895 (Llc71_13720)	-	1382191..1382571 (-)	381	WP_043734524.1	RidA family protein	-
Llc71_RS06900 (Llc71_13730)	budA	1382611..1383321 (-)	711	WP_046124919.1	acetolactate decarboxylase	-
Llc71_RS06905 (Llc71_13740)	ilvA	1383457..1384707 (-)	1251	WP_046124920.1	threonine ammonia-lyase IlvA	-
Llc71_RS06910 (Llc71_13750)	ilvC	1384766..1385788 (-)	1023	WP_046124921.1	ketol-acid reductoisomerase	-
Llc71_RS06915 (Llc71_13760)	ilvN	1385833..1386309 (-)	477	WP_011835157.1	acetolactate synthase small subunit	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31862.06 Da
• Isoelectric Point: 10.0569

>NTDB_id=92506 Llc71_RS06890 WP_248536502.1 1381196..1382044(-) (dprA) [Lactococcus cremoris strain 7-1]
MITNFDLFRWKKAGMTNLGVNKLLKFFRKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRADYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNINLLKNPKLAFVGSRLAGPSGIKAVQKIITELNQAFTIVSGLAKGIDTASHLSAIKTKIPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Nucleotide

• Length: 849 bp

>NTDB_id=92506 Llc71_RS06890 WP_248536502.1 1381196..1382044(-) (dprA) [Lactococcus cremoris strain 7-1]
ATGATTACAAATTTTGATTTATTTCGTTGGAAAAAAGCAGGAATGACCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCGCAAATATGATAGAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAAAAACTAAGAGCAGACTATAAAAAATTCTCCTCCTTTTCTATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTACAACCCACCCGTCTTAATTTTTTATCAGGGAAATATCAATTTATTAAAAAACCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCCATCAGGAATAAAAGCTGTCCAAAAAATTATCACAGAATTAAATCAAG
CTTTTACAATTGTAAGCGGGCTTGCTAAGGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAATACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTCCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGCAGTTTAATCACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTTTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	97.518	100	0.975
dprA	Streptococcus mutans UA159	58.633	98.582	0.578
dprA/cilB/dalA	Streptococcus mitis SK321	55.714	99.291	0.553
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	55.357	99.291	0.55
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.357	99.291	0.55
dprA	Bacillus subtilis subsp. subtilis str. 168	42.105	94.326	0.397
dprA	Vibrio campbellii strain DS40M4	35.644	100	0.383
dprA	Haemophilus influenzae Rd KW20	40	95.745	0.383
dprA	Legionella pneumophila strain ERS1305867	39.13	97.872	0.383