Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | U3H55_RS20010 | Genome accession | NZ_CP140792 |
| Coordinates | 4239796..4240116 (+) | Length | 106 a.a. |
| NCBI ID | WP_322862711.1 | Uniprot ID | - |
| Organism | Aeromonas allosaccharophila strain M01 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4234796..4245116
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U3H55_RS19995 | yfbV | 4235232..4235672 (-) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
| U3H55_RS20000 | - | 4235977..4237179 (+) | 1203 | WP_042059883.1 | acetate kinase | - |
| U3H55_RS20005 | pta | 4237236..4239416 (+) | 2181 | WP_042059882.1 | phosphate acetyltransferase | - |
| U3H55_RS20010 | comEA/comE1 | 4239796..4240116 (+) | 321 | WP_322862711.1 | ComEA family DNA-binding protein | Machinery gene |
| U3H55_RS20015 | galU | 4240213..4241124 (+) | 912 | WP_058053048.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| U3H55_RS20020 | - | 4241338..4242735 (+) | 1398 | WP_042059875.1 | peptide MFS transporter | - |
| U3H55_RS20025 | - | 4242810..4243781 (-) | 972 | WP_042059874.1 | response regulator | - |
| U3H55_RS20030 | - | 4244080..4244778 (+) | 699 | WP_042060132.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11253.24 Da Isoelectric Point: 9.9854
>NTDB_id=915609 U3H55_RS20010 WP_322862711.1 4239796..4240116(+) (comEA/comE1) [Aeromonas allosaccharophila strain M01]
MLMKKLSAVMLLACLPLFSQPALAAEKTAPKQTTTATVAKEGGKLNIHTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAVMLLACLPLFSQPALAAEKTAPKQTTTATVAKEGGKLNIHTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=915609 U3H55_RS20010 WP_322862711.1 4239796..4240116(+) (comEA/comE1) [Aeromonas allosaccharophila strain M01]
ATGCTGATGAAGAAACTCTCTGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGCGCTGGCCGCGGAGAA
AACTGCGCCCAAGCAAACAACCACAGCCACAGTCGCCAAGGAGGGCGGCAAACTGAATATCCATACCGCCACCCTTGCTG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAACGGCATTGGCCCGGCCACGCTGGAAGCCAATCGTGACATGATCATCGTCAAATA
A
ATGCTGATGAAGAAACTCTCTGCAGTCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCCGCGCTGGCCGCGGAGAA
AACTGCGCCCAAGCAAACAACCACAGCCACAGTCGCCAAGGAGGGCGGCAAACTGAATATCCATACCGCCACCCTTGCTG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAACGGCATTGGCCCGGCCACGCTGGAAGCCAATCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.903 |
100 |
0.5 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
46.903 |
100 |
0.5 |
| comEA | Vibrio cholerae C6706 |
49.524 |
99.057 |
0.491 |
| comEA | Vibrio cholerae strain A1552 |
49.524 |
99.057 |
0.491 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.434 |
93.396 |
0.406 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
41.489 |
88.679 |
0.368 |