Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   U0447_RS09855 Genome accession   NZ_CP139861
Coordinates   1901455..1902105 (+) Length   216 a.a.
NCBI ID   WP_000387330.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 16H2017-2     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1896455..1907105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0447_RS09825 - 1896938..1897153 (+) 216 WP_001232082.1 YozE family protein -
  U0447_RS09830 - 1897239..1898207 (+) 969 WP_000658183.1 PhoH family protein -
  U0447_RS09835 - 1898400..1898900 (+) 501 WP_050232669.1 GNAT family N-acetyltransferase -
  U0447_RS09840 - 1898903..1899229 (+) 327 Protein_1891 TfoX/Sxy family protein -
  U0447_RS09845 ald 1899530..1900641 (-) 1112 Protein_1892 alanine dehydrogenase -
  U0447_RS09850 - 1900818..1901387 (+) 570 WP_000443773.1 GNAT family N-acetyltransferase -
  U0447_RS09855 comEA/celA/cilE 1901455..1902105 (+) 651 WP_000387330.1 ComEA family DNA-binding protein Machinery gene
  U0447_RS09860 comEC/celB 1902089..1904329 (+) 2241 WP_024477777.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  U0447_RS09865 - 1904508..1904696 (+) 189 WP_001812421.1 hypothetical protein -
  U0447_RS09870 - 1904729..1905316 (+) 588 WP_000939895.1 ATP-binding cassette domain-containing protein -
  U0447_RS09875 - 1905320..1906501 (+) 1182 WP_050224421.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23229.65 Da        Isoelectric Point: 5.5171

>NTDB_id=911450 U0447_RS09855 WP_000387330.1 1901455..1902105(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 16H2017-2]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=911450 U0447_RS09855 WP_000387330.1 1901455..1902105(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 16H2017-2]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.