Detailed information NTG0909567

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SM123_RS09955
• Genome accession: NZ_CP139419
• Coordinates: 2058014..2058466 (-)
• Length: 150 a.a.
• NCBI ID: WP_151190960.1
• Uniprot ID: -
• Organism: Streptococcus lingualis strain S5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2053014..2063466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM123_RS09930 (SM123_09930)	folP	2053454..2054404 (-)	951	WP_320909532.1	dihydropteroate synthase	-
SM123_RS09935 (SM123_09935)	-	2054557..2055288 (-)	732	WP_320909533.1	type II CAAX endopeptidase family protein	-
SM123_RS09940 (SM123_09940)	-	2055361..2056554 (-)	1194	WP_023919646.1	acetate kinase	-
SM123_RS09945 (SM123_09945)	comYH	2056606..2057559 (-)	954	WP_049505971.1	class I SAM-dependent methyltransferase	Machinery gene
SM123_RS09950 (SM123_09950)	comGG	2057590..2058057 (-)	468	WP_320909534.1	competence type IV pilus minor pilin ComGG	-
SM123_RS09955 (SM123_09955)	comGF/cglF	2058014..2058466 (-)	453	WP_151190960.1	competence type IV pilus minor pilin ComGF	Machinery gene
SM123_RS09960 (SM123_09960)	comGE	2058456..2058743 (-)	288	WP_151190959.1	competence type IV pilus minor pilin ComGE	-
SM123_RS09965 (SM123_09965)	comYD	2058709..2059113 (-)	405	WP_269796580.1	competence type IV pilus minor pilin ComGD	Machinery gene
SM123_RS09970 (SM123_09970)	comYC	2059103..2059420 (-)	318	WP_101770912.1	competence type IV pilus major pilin ComGC	Machinery gene
SM123_RS09975 (SM123_09975)	comYB	2059417..2060448 (-)	1032	WP_320910010.1	competence type IV pilus assembly protein ComGB	Machinery gene
SM123_RS09980 (SM123_09980)	comYA	2060381..2061322 (-)	942	WP_320909535.1	competence type IV pilus ATPase ComGA	Machinery gene
SM123_RS09985 (SM123_09985)	-	2061410..2061799 (-)	390	WP_037608454.1	DUF1033 family protein	-
SM123_RS09990 (SM123_09990)	-	2062020..2063123 (-)	1104	WP_049475202.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 17277.70 Da
• Isoelectric Point: 6.1390

>NTDB_id=909567 SM123_RS09955 WP_151190960.1 2058014..2058466(-) (comGF/cglF) [Streptococcus lingualis strain S5]
MWNKGKVKAFTLLEALVALLVLSGGVLVFQGLTKLLHAELDYQAHQKQEEWILFQQQLQVELDRSHFEKVADNHIYLVQD
QKPIAIGQSKGDDIRKTDDKGRGYQPMISGVHSSQIWQEGELLHLRLNFEEGLEREYVYHVVPAIQNEKS

Nucleotide

• Length: 453 bp

>NTDB_id=909567 SM123_RS09955 WP_151190960.1 2058014..2058466(-) (comGF/cglF) [Streptococcus lingualis strain S5]
ATGTGGAATAAAGGAAAGGTCAAGGCCTTTACCCTGCTCGAAGCCTTGGTCGCTCTCTTAGTGCTTAGTGGGGGAGTGTT
GGTCTTTCAAGGCTTGACCAAGCTTCTGCATGCTGAATTGGACTACCAGGCGCATCAAAAGCAGGAAGAATGGATACTTT
TTCAGCAACAATTGCAGGTGGAATTGGACCGGAGTCATTTTGAAAAAGTAGCGGACAATCATATCTACTTGGTTCAGGAT
CAAAAACCAATTGCTATTGGCCAATCTAAAGGAGATGATATCCGAAAAACAGATGATAAGGGCAGGGGCTATCAGCCTAT
GATTTCAGGTGTTCACTCTAGTCAGATTTGGCAGGAGGGAGAGTTGCTTCATCTGCGTTTGAATTTTGAAGAAGGTCTAG
AAAGGGAGTATGTCTACCATGTGGTACCAGCGATACAAAATGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (43-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	55.396	92.667	0.513
comGF/cglF	Streptococcus mitis SK321	54.676	92.667	0.507
comGF/cglF	Streptococcus pneumoniae Rx1	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae D39	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae R6	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae TIGR4	55.882	90.667	0.507
comYF	Streptococcus mutans UA159	42.647	90.667	0.387
comYF	Streptococcus mutans UA140	42.647	90.667	0.387
comGF	Lactococcus lactis subsp. cremoris KW2	38.298	94	0.36