Detailed information NTG0909566

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SM123_RS09945
• Genome accession: NZ_CP139419
• Coordinates: 2056606..2057559 (-)
• Length: 317 a.a.
• NCBI ID: WP_049505971.1
• Uniprot ID: -
• Organism: Streptococcus lingualis strain S5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2051606..2062559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM123_RS09925 (SM123_09925)	-	2052143..2053453 (-)	1311	WP_320909531.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
SM123_RS09930 (SM123_09930)	folP	2053454..2054404 (-)	951	WP_320909532.1	dihydropteroate synthase	-
SM123_RS09935 (SM123_09935)	-	2054557..2055288 (-)	732	WP_320909533.1	type II CAAX endopeptidase family protein	-
SM123_RS09940 (SM123_09940)	-	2055361..2056554 (-)	1194	WP_023919646.1	acetate kinase	-
SM123_RS09945 (SM123_09945)	comYH	2056606..2057559 (-)	954	WP_049505971.1	class I SAM-dependent methyltransferase	Machinery gene
SM123_RS09950 (SM123_09950)	comGG	2057590..2058057 (-)	468	WP_320909534.1	competence type IV pilus minor pilin ComGG	-
SM123_RS09955 (SM123_09955)	comGF/cglF	2058014..2058466 (-)	453	WP_151190960.1	competence type IV pilus minor pilin ComGF	Machinery gene
SM123_RS09960 (SM123_09960)	comGE	2058456..2058743 (-)	288	WP_151190959.1	competence type IV pilus minor pilin ComGE	-
SM123_RS09965 (SM123_09965)	comYD	2058709..2059113 (-)	405	WP_269796580.1	competence type IV pilus minor pilin ComGD	Machinery gene
SM123_RS09970 (SM123_09970)	comYC	2059103..2059420 (-)	318	WP_101770912.1	competence type IV pilus major pilin ComGC	Machinery gene
SM123_RS09975 (SM123_09975)	comYB	2059417..2060448 (-)	1032	WP_320910010.1	competence type IV pilus assembly protein ComGB	Machinery gene
SM123_RS09980 (SM123_09980)	comYA	2060381..2061322 (-)	942	WP_320909535.1	competence type IV pilus ATPase ComGA	Machinery gene
SM123_RS09985 (SM123_09985)	-	2061410..2061799 (-)	390	WP_037608454.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35903.62 Da
• Isoelectric Point: 4.2012

>NTDB_id=909566 SM123_RS09945 WP_049505971.1 2056606..2057559(-) (comYH) [Streptococcus lingualis strain S5]
MNFEKIEQAYTYLLENTQSIQNELSTNFYDALIEQNAMYLEGKTDLDIVNNNSKKLKELGLSKEEWRRAYQFLFMKAAQT
EPLQANHQFTPDAIGFIITFLIDQLAKSDQLDVLEVGSGTGNLAETIVNNSRLTIDYLGLEVDDLLIDLSASIADVMESS
VVFAQGDAVRPQVLKESDLIVSDLPIGYYPDDAIAQRYQVASSEGHTYAHHLMMEQALKYLKPQGVAIFLAPNNLLTSPQ
SDLLKAWLTDKAQILAMLTLPESLFSNPAYAKTIFVLRKQEEESVQPFVYPFTDLQDHDQVVHFMESFQNWLKDSEI

Nucleotide

• Length: 954 bp

>NTDB_id=909566 SM123_RS09945 WP_049505971.1 2056606..2057559(-) (comYH) [Streptococcus lingualis strain S5]
ATGAATTTCGAAAAAATTGAACAAGCTTATACCTATCTATTAGAAAACACTCAAAGTATTCAAAATGAATTGTCGACCAA
CTTTTATGACGCCTTGATTGAACAAAATGCCATGTATTTGGAGGGCAAGACGGATCTAGACATTGTTAATAACAATAGCA
AAAAATTAAAAGAACTAGGTTTAAGTAAGGAAGAATGGCGCAGAGCCTACCAATTCCTTTTTATGAAAGCTGCTCAGACA
GAACCTTTACAAGCAAATCACCAGTTCACACCAGATGCGATTGGTTTTATCATTACATTTTTGATCGATCAGTTGGCCAA
AAGCGACCAACTGGATGTCCTAGAAGTGGGAAGTGGAACCGGAAATCTCGCTGAGACTATTGTCAACAATAGTCGCCTCA
CGATTGATTACTTAGGATTGGAAGTAGATGATCTTTTGATTGATCTATCTGCTAGTATCGCAGACGTGATGGAGTCTAGT
GTTGTCTTTGCACAAGGCGACGCGGTGCGTCCGCAAGTGTTGAAAGAAAGTGACTTGATCGTTAGTGATCTTCCTATTGG
ATACTATCCAGATGATGCAATTGCCCAGCGCTATCAGGTAGCGAGCTCCGAAGGCCATACCTATGCCCATCACCTCATGA
TGGAACAGGCTCTGAAATACCTGAAACCTCAAGGAGTAGCCATCTTTTTAGCTCCAAACAACCTCTTGACGAGCCCTCAG
AGTGATCTGTTAAAAGCTTGGCTAACAGACAAGGCTCAAATCCTTGCCATGCTGACCTTGCCAGAATCTCTCTTTTCAAA
TCCAGCCTATGCTAAGACGATTTTCGTCCTACGAAAACAAGAAGAAGAGTCTGTTCAGCCCTTTGTCTATCCGTTTACCG
ATCTCCAGGATCACGACCAGGTGGTTCACTTTATGGAAAGTTTCCAAAACTGGTTAAAGGATAGTGAAATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA159	62.222	99.369	0.618
comYH	Streptococcus mutans UA140	62.222	99.369	0.618