Detailed information NTG0909494

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: SM121_RS06735
• Genome accession: NZ_CP139418
• Coordinates: 1381814..1382662 (+)
• Length: 282 a.a.
• NCBI ID: WP_049498831.1
• Uniprot ID: -
• Organism: Streptococcus dentalis strain S1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1376814..1387662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM121_RS06710 (SM121_06710)	-	1376830..1377657 (+)	828	WP_320910701.1	ABC transporter permease	-
SM121_RS06715 (SM121_06715)	-	1377676..1379106 (+)	1431	WP_155171893.1	zinc ribbon domain-containing protein	-
SM121_RS06720 (SM121_06720)	ylqF	1379215..1380066 (+)	852	WP_049498814.1	ribosome biogenesis GTPase YlqF	-
SM121_RS06725 (SM121_06725)	-	1380053..1380820 (+)	768	WP_049504274.1	ribonuclease HII	-
SM121_RS06730 (SM121_06730)	-	1380824..1381753 (+)	930	WP_049498816.1	ROK family protein	-
SM121_RS06735 (SM121_06735)	dprA/cilB/dalA	1381814..1382662 (+)	849	WP_049498831.1	DNA-processing protein DprA	Machinery gene
SM121_RS06740 (SM121_06740)	topA	1382749..1384830 (+)	2082	WP_049498817.1	type I DNA topoisomerase	-
SM121_RS06745 (SM121_06745)	trmFO	1385033..1386367 (+)	1335	WP_320910702.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
SM121_RS06750 (SM121_06750)	-	1386461..1387288 (+)	828	WP_155124879.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31553.29 Da
• Isoelectric Point: 6.3068

>NTDB_id=909494 SM121_RS06735 WP_049498831.1 1381814..1382662(+) (dprA/cilB/dalA) [Streptococcus dentalis strain S1]
MEKFEIYKLKEAGLSNEQVLRVLDYCRKDQALPSIEEIARIARCRSIIHFVDKYLQLDEDRLHKEFERFPSLSIFDPEYP
EELLQIYNPPVLLFYQGDLQLLSKPKIAVVGARETTREGVRSVEKIIKELGNELVIVSGLAKGIDATAHYASIRNGGKTI
GVIGTGLDVSYPKSNQRLQAHMGENHLILSEYGPGQAPLKFHFPERNRIIAGLCQAVIVAEARLRSGSLITCERAMEEGR
DVFAIPGNILDGKSAGCHHLIQEGAKLVTSGQDILDELKYEL

Nucleotide

• Length: 849 bp

>NTDB_id=909494 SM121_RS06735 WP_049498831.1 1381814..1382662(+) (dprA/cilB/dalA) [Streptococcus dentalis strain S1]
ATGGAGAAATTTGAAATCTATAAATTAAAAGAAGCCGGTTTATCAAATGAGCAAGTCTTGAGAGTTTTGGACTACTGTAG
GAAAGACCAAGCCTTACCAAGCATAGAAGAGATAGCGAGGATCGCTCGCTGTCGTAGTATCATTCATTTTGTAGACAAAT
ACCTGCAGCTGGATGAAGACCGTTTACACAAGGAGTTTGAACGGTTCCCATCTCTATCCATTTTTGATCCTGAATACCCT
GAGGAATTGCTACAGATCTACAATCCTCCTGTACTCCTTTTTTACCAAGGGGATTTGCAACTGTTAAGCAAACCGAAGAT
TGCAGTTGTTGGAGCTCGAGAGACCACGCGAGAAGGGGTTCGTTCTGTAGAGAAGATAATTAAGGAACTTGGAAATGAAC
TGGTCATTGTTAGTGGACTTGCTAAGGGGATTGATGCGACCGCTCATTATGCCAGTATCCGCAATGGTGGCAAGACCATC
GGAGTGATTGGAACAGGACTAGATGTCTCTTATCCTAAGAGCAATCAAAGACTGCAGGCACATATGGGGGAAAACCATCT
GATCTTGAGCGAGTATGGTCCAGGGCAGGCACCACTTAAGTTTCATTTTCCTGAGAGAAATCGCATCATTGCAGGTCTCT
GTCAGGCAGTGATTGTGGCAGAGGCGCGACTCCGTTCAGGGAGTTTGATTACTTGTGAGCGTGCTATGGAAGAAGGACGA
GACGTTTTTGCTATTCCGGGAAATATTTTAGATGGAAAATCTGCAGGCTGCCATCACCTGATTCAAGAAGGCGCAAAGCT
TGTCACCTCAGGCCAGGACATTCTTGATGAATTGAAATACGAATTGTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	65.48	99.645	0.652
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	65.125	99.645	0.649
dprA/cilB/dalA	Streptococcus pneumoniae D39	65.125	99.645	0.649
dprA/cilB/dalA	Streptococcus pneumoniae R6	65.125	99.645	0.649
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	65.125	99.645	0.649
dprA/cilB/dalA	Streptococcus mitis SK321	64.769	99.645	0.645
dprA	Streptococcus mutans UA159	61.071	99.291	0.606
dprA	Lactococcus lactis subsp. cremoris KW2	51.957	99.645	0.518
dprA	Latilactobacillus sakei subsp. sakei 23K	45.2	88.652	0.401
dprA	Legionella pneumophila strain ERS1305867	43.933	84.752	0.372