Detailed information NTG0908596

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SOI77_RS01570
• Genome accession: NZ_CP139275
• Coordinates: 333581..334639 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HCG138
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 328581..339639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI77_RS01555 (SOI77_01555)	-	329683..330015 (+)	333	WP_002116981.1	hypothetical protein	-
SOI77_RS01560 (SOI77_01560)	rrmA	330018..330842 (+)	825	WP_081310304.1	putative RNA methyltransferase	-
SOI77_RS01565 (SOI77_01565)	ponA	330858..333419 (-)	2562	WP_320561996.1	penicillin-binding protein PBP1a	-
SOI77_RS01570 (SOI77_01570)	pilM	333581..334639 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
SOI77_RS01575 (SOI77_01575)	pilN	334639..335280 (+)	642	WP_032004890.1	PilN domain-containing protein	Machinery gene
SOI77_RS01580 (SOI77_01580)	pilO	335277..336056 (+)	780	WP_320561997.1	type 4a pilus biogenesis protein PilO	Machinery gene
SOI77_RS01585 (SOI77_01585)	pilP	336068..336595 (+)	528	WP_017481730.1	pilus assembly protein PilP	Machinery gene
SOI77_RS01590 (SOI77_01590)	pilQ	336658..338784 (+)	2127	WP_320561998.1	type IV pilus secretin PilQ family protein	Machinery gene
SOI77_RS01595 (SOI77_01595)	aroK	338796..339365 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=908596 SOI77_RS01570 WP_005067078.1 333581..334639(+) (pilM) [Acinetobacter pittii strain HCG138]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=908596 SOI77_RS01570 WP_005067078.1 333581..334639(+) (pilM) [Acinetobacter pittii strain HCG138]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGGTTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGAGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTGGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGGCGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42