Detailed information NTG0908550

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SOI80_RS01690
• Genome accession: NZ_CP139270
• Coordinates: 358405..359463 (+)
• Length: 352 a.a.
• NCBI ID: WP_032006368.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HCG62
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 353405..364463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI80_RS01675 (SOI80_01675)	-	354507..354839 (+)	333	WP_002116981.1	hypothetical protein	-
SOI80_RS01680 (SOI80_01680)	rrmA	354842..355666 (+)	825	WP_080973453.1	putative RNA methyltransferase	-
SOI80_RS01685 (SOI80_01685)	ponA	355682..358243 (-)	2562	WP_032006370.1	penicillin-binding protein PBP1a	-
SOI80_RS01690 (SOI80_01690)	pilM	358405..359463 (+)	1059	WP_032006368.1	pilus assembly protein PilM	Machinery gene
SOI80_RS01695 (SOI80_01695)	pilN	359463..360104 (+)	642	WP_002116944.1	PilN domain-containing protein	Machinery gene
SOI80_RS01700 (SOI80_01700)	pilO	360101..360853 (+)	753	WP_032006367.1	type 4a pilus biogenesis protein PilO	Machinery gene
SOI80_RS01705 (SOI80_01705)	pilP	360864..361391 (+)	528	WP_002116864.1	pilus assembly protein PilP	Machinery gene
SOI80_RS01710 (SOI80_01710)	pilQ	361454..363580 (+)	2127	WP_017481729.1	type IV pilus secretin PilQ	Machinery gene
SOI80_RS01715 (SOI80_01715)	aroK	363592..364161 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39015.60 Da
• Isoelectric Point: 4.4213

>NTDB_id=908550 SOI80_RS01690 WP_032006368.1 358405..359463(+) (pilM) [Acinetobacter pittii strain HCG62]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKECSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=908550 SOI80_RS01690 WP_032006368.1 358405..359463(+) (pilM) [Acinetobacter pittii strain HCG62]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAATGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAGAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42