Detailed information NTG0908086

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SON02_RS09240
• Genome accession: NZ_CP139211
• Coordinates: 2115525..2116133 (+)
• Length: 202 a.a.
• NCBI ID: WP_135029541.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2110525..2121133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS09210 (SON02_09190)	-	2110608..2110748 (+)	141	Protein_1772	PLP-dependent transferase	-
SON02_RS09215	-	2110849..2111193 (+)	345	WP_348628371.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	-
SON02_RS09220 (SON02_09195)	-	2111084..2112004 (+)	921	Protein_1774	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	-
SON02_RS09225 (SON02_09200)	-	2112030..2113490 (+)	1461	WP_228063833.1	SLC13 family permease	-
SON02_RS09230 (SON02_09205)	-	2113503..2113769 (+)	267	WP_135029536.1	chorismate mutase	-
SON02_RS09235 (SON02_09210)	upp	2113990..2114619 (+)	630	WP_135029539.1	uracil phosphoribosyltransferase	-
SON02_RS09240 (SON02_09215)	clpP	2115525..2116133 (+)	609	WP_135029541.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SON02_RS09245 (SON02_09220)	-	2116826..2117098 (+)	273	WP_135029543.1	YlbG family protein	-
SON02_RS09250 (SON02_09225)	-	2117186..2118367 (+)	1182	WP_135029545.1	ABC transporter substrate-binding protein	-
SON02_RS09255 (SON02_09230)	-	2118533..2119420 (+)	888	WP_135029547.1	branched-chain amino acid ABC transporter permease	-
SON02_RS09260 (SON02_09235)	-	2119423..2120373 (+)	951	WP_135029549.1	branched-chain amino acid ABC transporter permease	-

Sequence

Protein

• Length: 202 a.a.
• Molecular weight: 22295.59 Da
• Isoelectric Point: 5.2889

>NTDB_id=908086 SON02_RS09240 WP_135029541.1 2115525..2116133(+) (clpP) [Streptococcus sp. LysM4]
MEKENTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLA
IVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPHAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKIL
ADNSGKSVKQIHKDAERDYWMSAKETLDYGFIDQIMENNQLK

Nucleotide

• Length: 609 bp

>NTDB_id=908086 SON02_RS09240 WP_135029541.1 2115525..2116133(+) (clpP) [Streptococcus sp. LysM4]
ATTGAAAAGGAGAACACTATGATTCCTGTAGTTATTGAACAAACTAGCCGTGGGGAACGCTCGTACGATATCTACTCACG
TCTTTTAAAAGATCGTATTATTATGTTAACAGGTCCTGTTGAGGACAATATGGCCAATTCTGTTATTGCTCAGTTGCTCT
TCCTTGATGCTCAAGATCCGACCAAGGATATTTATCTCTATGTCAATACTCCTGGTGGCTCTGTTTCAGCAGGTCTTGCG
ATTGTGGATACGATGAATTTTATTAAGGCAGATGTGCAAACCATTGTCATGGGAATGGCAGCCAGCATGGGGACTGTCAT
TGCTTCAAGTGGTGCTAAAGGCAAACGCTTTATGTTGCCGCATGCAGAATATATGATTCACCAACCAATGGGCGGTACTG
GTGGCGGTACCCAACAAACGGATATGGCTATTGCTGCGGAACACTTGCTCAAGACCCGTAATACCCTTGAAAAGATCCTT
GCGGATAATTCAGGAAAGAGTGTCAAGCAAATTCACAAAGACGCTGAGCGCGATTACTGGATGAGTGCCAAAGAAACTCT
TGATTATGGCTTTATTGACCAAATTATGGAAAACAATCAGTTGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (17-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	93.367	97.03	0.906
clpP	Streptococcus pyogenes MGAS315	93.367	97.03	0.906
clpP	Streptococcus pneumoniae R6	92.308	96.535	0.891
clpP	Streptococcus pneumoniae Rx1	92.308	96.535	0.891
clpP	Streptococcus pneumoniae D39	92.308	96.535	0.891
clpP	Streptococcus pneumoniae TIGR4	92.308	96.535	0.891
clpP	Streptococcus mutans UA159	87.129	100	0.871
clpP	Streptococcus thermophilus LMG 18311	89.286	97.03	0.866
clpP	Streptococcus thermophilus LMD-9	89.286	97.03	0.866
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.714	97.03	0.832
clpP	Lactococcus lactis subsp. cremoris KW2	85.204	97.03	0.827
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	95.545	0.554
clpP	Bacillus subtilis subsp. subtilis str. 168	56.122	97.03	0.545