Detailed information NTG0907962

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SLQ83_RS10415
• Genome accession: NZ_CP139208
• Coordinates: 2160705..2161406 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain HNNY86G
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2155705..2166406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLQ83_RS10385 (SLQ83_10385)	-	2156012..2156455 (-)	444	WP_001246675.1	SRPBCC family protein	-
SLQ83_RS10390 (SLQ83_10390)	tadA	2156525..2157028 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
SLQ83_RS10395 (SLQ83_10395)	-	2157035..2158159 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
SLQ83_RS10400 (SLQ83_10400)	ung	2158156..2158869 (-)	714	WP_042050084.1	uracil-DNA glycosylase	-
SLQ83_RS10405 (SLQ83_10405)	-	2158920..2159516 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
SLQ83_RS10410 (SLQ83_10410)	gspK	2159746..2160705 (-)	960	WP_000301461.1	type II secretion system minor pseudopilin GspK	-
SLQ83_RS10415 (SLQ83_10415)	xcpW	2160705..2161406 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SLQ83_RS10420 (SLQ83_10420)	xcpV	2161406..2161786 (-)	381	WP_042050087.1	type II secretion system minor pseudopilin GspI	Machinery gene
SLQ83_RS10425 (SLQ83_10425)	-	2161776..2162330 (-)	555	WP_000841373.1	type II secretion system protein	-
SLQ83_RS10430 (SLQ83_10430)	-	2162340..2162948 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
SLQ83_RS10435 (SLQ83_10435)	-	2162986..2163759 (-)	774	WP_000497298.1	TatD family hydrolase	-
SLQ83_RS10440 (SLQ83_10440)	-	2163777..2164118 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
SLQ83_RS10445 (SLQ83_10445)	-	2164130..2165110 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
SLQ83_RS10450 (SLQ83_10450)	kdsB	2165122..2165883 (-)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=907962 SLQ83_RS10415 WP_000594572.1 2160705..2161406(-) (xcpW) [Acinetobacter baumannii strain HNNY86G]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=907962 SLQ83_RS10415 WP_000594572.1 2160705..2161406(-) (xcpW) [Acinetobacter baumannii strain HNNY86G]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAACTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991