Detailed information NTG0901744

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SD207_RS01425
• Genome accession: NZ_CP138324
• Coordinates: 303110..304168 (+)
• Length: 352 a.a.
• NCBI ID: WP_031951026.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain JBAB
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 298110..309168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD207_RS01410 (SD207_01410)	-	299216..299548 (+)	333	WP_000169597.1	hypothetical protein	-
SD207_RS01415 (SD207_01415)	-	299551..300375 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
SD207_RS01420 (SD207_01420)	ponA	300393..302948 (-)	2556	WP_025467908.1	penicillin-binding protein PBP1a	-
SD207_RS01425 (SD207_01425)	pilM	303110..304168 (+)	1059	WP_031951026.1	pilus assembly protein PilM	Machinery gene
SD207_RS01430 (SD207_01430)	pilN	304168..304809 (+)	642	WP_000201226.1	PilN domain-containing protein	Machinery gene
SD207_RS01435 (SD207_01435)	pilO	304806..305546 (+)	741	WP_002048088.1	type 4a pilus biogenesis protein PilO	Machinery gene
SD207_RS01440 (SD207_01440)	pilP	305557..306084 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
SD207_RS01445 (SD207_01445)	pilQ	306147..308273 (+)	2127	WP_002048104.1	type IV pilus secretin PilQ	Machinery gene
SD207_RS01450 (SD207_01450)	aroK	308285..308854 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39063.60 Da
• Isoelectric Point: 4.4618

>NTDB_id=901744 SD207_RS01425 WP_031951026.1 303110..304168(+) (pilM) [Acinetobacter baumannii strain JBAB]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLQDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=901744 SD207_RS01425 WP_031951026.1 303110..304168(+) (pilM) [Acinetobacter baumannii strain JBAB]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCAGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423