Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ABD411_RS03405 Genome accession   NZ_CP155734
Coordinates   639658..639840 (+) Length   60 a.a.
NCBI ID   WP_003056293.1    Uniprot ID   A0ABU0A7A8
Organism   Streptococcus pyogenes strain 8373/17     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 634658..644840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABD411_RS03375 (ABD411_03360) - 635119..635550 (+) 432 WP_002987513.1 DUF1617 family protein -
  ABD411_RS03380 (ABD411_03365) - 635553..636170 (+) 618 WP_085613961.1 DUF1366 domain-containing protein -
  ABD411_RS03385 (ABD411_03370) - 636180..636452 (+) 273 WP_085613962.1 hypothetical protein -
  ABD411_RS03390 (ABD411_03375) - 636449..636676 (+) 228 WP_003058873.1 phage holin -
  ABD411_RS03395 (ABD411_03380) - 636792..637997 (+) 1206 WP_085613963.1 glucosaminidase domain-containing protein -
  ABD411_RS03400 (ABD411_03385) - 638619..639419 (-) 801 WP_021340119.1 DNA/RNA non-specific endonuclease -
  ABD411_RS03405 (ABD411_03390) prx 639658..639840 (+) 183 WP_003056293.1 hypothetical protein Regulator
  ABD411_RS03410 (ABD411_03395) - 640089..640466 (+) 378 WP_002993028.1 OsmC family protein -
  ABD411_RS03415 (ABD411_03400) - 640459..640845 (+) 387 WP_002990406.1 YbgA family protein -
  ABD411_RS03420 (ABD411_03405) - 640918..641994 (+) 1077 WP_010922123.1 FtsX-like permease family protein -
  ABD411_RS03425 (ABD411_03410) - 642004..642672 (+) 669 WP_011017620.1 ABC transporter ATP-binding protein -
  ABD411_RS03430 (ABD411_03415) - 642776..643693 (-) 918 WP_023612345.1 neutral zinc metallopeptidase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6877.91 Da        Isoelectric Point: 4.2840

>NTDB_id=898021 ABD411_RS03405 WP_003056293.1 639658..639840(+) (prx) [Streptococcus pyogenes strain 8373/17]
MLTYDEFKQAIDHGYITGDTVAIVRKNGQIFDYVLPGEPVKPWEILTEVIVEAVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=898021 ABD411_RS03405 WP_003056293.1 639658..639840(+) (prx) [Streptococcus pyogenes strain 8373/17]
ATGCTAACATACGACGAATTTAAGCAAGCAATCGACCATGGGTATATCACAGGAGACACAGTAGCGATTGTGCGCAAAAA
CGGACAGATCTTTGATTATGTGTTGCCTGGTGAGCCTGTGAAACCGTGGGAAATTTTGACTGAAGTAATAGTAGAAGCAG
TGCTGAGGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

78.049

68.333

0.533