Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   ABC812_RS04290 Genome accession   NZ_CP155537
Coordinates   843853..844503 (+) Length   216 a.a.
NCBI ID   WP_000387330.1    Uniprot ID   Q8DQ41
Organism   Streptococcus pneumoniae strain DP1322     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 838853..849503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC812_RS04260 (ABC812_04260) - 839336..839551 (+) 216 WP_001232082.1 YozE family protein -
  ABC812_RS04265 (ABC812_04265) - 839637..840605 (+) 969 WP_000658183.1 PhoH family protein -
  ABC812_RS04270 (ABC812_04270) - 840798..841298 (+) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  ABC812_RS04275 (ABC812_04275) - 841301..841627 (+) 327 Protein_842 TfoX/Sxy family protein -
  ABC812_RS04280 (ABC812_04280) ald 841928..843039 (-) 1112 Protein_843 alanine dehydrogenase -
  ABC812_RS04285 (ABC812_04285) - 843216..843785 (+) 570 WP_000443899.1 GNAT family N-acetyltransferase -
  ABC812_RS04290 (ABC812_04290) comEA/celA/cilE 843853..844503 (+) 651 WP_000387330.1 ComEA family DNA-binding protein Machinery gene
  ABC812_RS04295 (ABC812_04295) comEC/celB 844487..846727 (+) 2241 WP_000942407.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ABC812_RS04300 (ABC812_04300) - 846906..847094 (+) 189 WP_010976492.1 hypothetical protein -
  ABC812_RS04305 (ABC812_04305) - 847126..847713 (+) 588 Protein_848 ABC transporter ATP-binding protein -
  ABC812_RS04310 (ABC812_04310) - 847717..848898 (+) 1182 WP_000655958.1 ABC transporter permease -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23229.65 Da        Isoelectric Point: 5.5171

>NTDB_id=897269 ABC812_RS04290 WP_000387330.1 843853..844503(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain DP1322]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=897269 ABC812_RS04290 WP_000387330.1 843853..844503(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain DP1322]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DQ41

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.