Detailed information NTG0894794

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L07_RS04385
• Genome accession: NZ_CP137073
• Coordinates: 913935..914993 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SNUBHAB0197
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 908935..919993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L07_RS04360 (R3L07_04365)	aroK	909208..909777 (-)	570	WP_000643712.1	shikimate kinase AroK	-
R3L07_RS04365 (R3L07_04370)	pilQ	909789..911951 (-)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L07_RS04370 (R3L07_04375)	pilP	912019..912546 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L07_RS04375 (R3L07_04380)	pilO	912557..913297 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L07_RS04380 (R3L07_04385)	pilN	913294..913935 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
R3L07_RS04385 (R3L07_04390)	pilM	913935..914993 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
R3L07_RS04390 (R3L07_04395)	ponA	915156..917711 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
R3L07_RS04395 (R3L07_04400)	-	917729..918553 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
R3L07_RS04400 (R3L07_04405)	-	918556..918888 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=894794 R3L07_RS04385 WP_002014066.1 913935..914993(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0197]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894794 R3L07_RS04385 WP_002014066.1 913935..914993(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0197]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423