Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | R2X36_RS04300 | Genome accession | NZ_CP137009 |
| Coordinates | 869624..869944 (-) | Length | 106 a.a. |
| NCBI ID | WP_317842034.1 | Uniprot ID | - |
| Organism | Aeromonas media strain QST31 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 864624..874944
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2X36_RS04280 (R2X36_04280) | - | 864976..865650 (-) | 675 | WP_226171535.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| R2X36_RS04285 (R2X36_04285) | - | 865964..866935 (+) | 972 | WP_042649086.1 | response regulator | - |
| R2X36_RS04290 (R2X36_04290) | - | 867008..868405 (-) | 1398 | WP_226171542.1 | peptide MFS transporter | - |
| R2X36_RS04295 (R2X36_04295) | galU | 868619..869530 (-) | 912 | WP_139439632.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| R2X36_RS04300 (R2X36_04300) | comEA | 869624..869944 (-) | 321 | WP_317842034.1 | ComEA family DNA-binding protein | Machinery gene |
| R2X36_RS04305 (R2X36_04305) | cysQ | 870114..870869 (+) | 756 | WP_317842035.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| R2X36_RS04310 (R2X36_04310) | - | 870961..871257 (-) | 297 | WP_005327955.1 | YciI family protein | - |
| R2X36_RS04315 (R2X36_04315) | - | 871281..871832 (-) | 552 | WP_005327953.1 | septation protein A | - |
| R2X36_RS04320 (R2X36_04320) | - | 871973..873478 (-) | 1506 | WP_317842036.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| R2X36_RS04325 (R2X36_04325) | - | 873710..874345 (+) | 636 | WP_317842037.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11082.91 Da Isoelectric Point: 8.9589
>NTDB_id=894216 R2X36_RS04300 WP_317842034.1 869624..869944(-) (comEA) [Aeromonas media strain QST31]
MSYKTLTAALLLGCLPLLSQPLLAADKPAAKPATTVTSTKEVGKINLNTASADELAALKGIGEKKAQAIVDYREKQGKFT
SVDQLAEVSGIGPATLDANRDMIIVK
MSYKTLTAALLLGCLPLLSQPLLAADKPAAKPATTVTSTKEVGKINLNTASADELAALKGIGEKKAQAIVDYREKQGKFT
SVDQLAEVSGIGPATLDANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=894216 R2X36_RS04300 WP_317842034.1 869624..869944(-) (comEA) [Aeromonas media strain QST31]
ATGAGCTACAAAACGCTGACCGCCGCCCTTCTGCTGGGCTGCCTGCCGCTGTTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCAGCCGCCAAACCGGCCACGACGGTCACCAGTACCAAGGAGGTGGGCAAGATCAACCTCAATACCGCCAGTGCCGATG
AACTCGCGGCGCTGAAAGGCATCGGCGAGAAAAAAGCGCAAGCCATCGTCGACTACCGCGAAAAACAGGGCAAGTTCACC
TCGGTGGATCAGCTGGCGGAGGTGAGTGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
ATGAGCTACAAAACGCTGACCGCCGCCCTTCTGCTGGGCTGCCTGCCGCTGTTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCAGCCGCCAAACCGGCCACGACGGTCACCAGTACCAAGGAGGTGGGCAAGATCAACCTCAATACCGCCAGTGCCGATG
AACTCGCGGCGCTGAAAGGCATCGGCGAGAAAAAAGCGCAAGCCATCGTCGACTACCGCGAAAAACAGGGCAAGTTCACC
TCGGTGGATCAGCTGGCGGAGGTGAGTGGCATAGGGCCCGCCACCCTGGATGCGAACCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
52.336 |
100 |
0.528 |
| comEA | Vibrio cholerae strain A1552 |
52.336 |
100 |
0.528 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.706 |
100 |
0.491 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.472 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.918 |
92.453 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.176 |
96.226 |
0.396 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.176 |
96.226 |
0.396 |
| comEA | Vibrio campbellii strain DS40M4 |
40.206 |
91.509 |
0.368 |