Detailed information NTG0893626

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: AAH980_RS10480
• Genome accession: NZ_CP154856
• Coordinates: 2228047..2229105 (-)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain Ab25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2223047..2234105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH980_RS10455 (AAH980_10455)	aroK	2223319..2223888 (-)	570	WP_002051689.1	shikimate kinase AroK	-
AAH980_RS10460 (AAH980_10460)	pilQ	2223900..2226065 (-)	2166	WP_004884727.1	type IV pilus secretin PilQ family protein	Machinery gene
AAH980_RS10465 (AAH980_10465)	pilP	2226128..2226655 (-)	528	WP_284080622.1	pilus assembly protein PilP	Machinery gene
AAH980_RS10470 (AAH980_10470)	pilO	2226666..2227406 (-)	741	WP_245134252.1	type 4a pilus biogenesis protein PilO	Machinery gene
AAH980_RS10475 (AAH980_10475)	pilN	2227403..2228047 (-)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
AAH980_RS10480 (AAH980_10480)	comM	2228047..2229105 (-)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
AAH980_RS10485 (AAH980_10485)	ponA	2229267..2231826 (+)	2560	Protein_2057	penicillin-binding protein PBP1a	-
AAH980_RS10490 (AAH980_10490)	-	2231844..2232668 (-)	825	WP_284080512.1	putative RNA methyltransferase	-
AAH980_RS10495 (AAH980_10495)	-	2232671..2233003 (-)	333	WP_002051722.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=893626 AAH980_RS10480 WP_004711654.1 2228047..2229105(-) (comM) [Acinetobacter nosocomialis strain Ab25]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=893626 AAH980_RS10480 WP_004711654.1 2228047..2229105(-) (comM) [Acinetobacter nosocomialis strain Ab25]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGCGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGACGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATCGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterProScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM/pilM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426