Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   R3H37_RS07775 Genome accession   NZ_CP136948
Coordinates   1565753..1566304 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Spyo01     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1560753..1571304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3H37_RS07740 (R3H37_07745) - 1560757..1561500 (-) 744 WP_161761883.1 class I SAM-dependent DNA methyltransferase -
  R3H37_RS07745 (R3H37_07750) rsfS 1561548..1561901 (-) 354 WP_011017339.1 ribosome silencing factor -
  R3H37_RS07750 (R3H37_07755) yqeK 1561925..1562518 (-) 594 WP_129284405.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  R3H37_RS07755 (R3H37_07760) - 1562515..1563147 (-) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  R3H37_RS07760 (R3H37_07765) yhbY 1563216..1563524 (-) 309 WP_111685182.1 ribosome assembly RNA-binding protein YhbY -
  R3H37_RS07765 (R3H37_07770) yqeH 1563549..1564667 (-) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  R3H37_RS07770 (R3H37_07775) - 1564667..1565194 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  R3H37_RS07775 (R3H37_07780) comX/sigX/comX2/sigX2 1565753..1566304 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=893623 R3H37_RS07775 WP_010921894.1 1565753..1566304(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Spyo01]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=893623 R3H37_RS07775 WP_010921894.1 1565753..1566304(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Spyo01]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.