Detailed information NTG0892060

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RAS18_RS17180
• Genome accession: NZ_CP136635
• Coordinates: 3421741..3422337 (+)
• Length: 198 a.a.
• NCBI ID: WP_003326811.1
• Uniprot ID: A0AAP3CU21
• Organism: Bacillus atrophaeus subsp. globigii strain Hab-5
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3416741..3427337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAS18_RS17145	aspP	3417107..3418669 (+)	1563	WP_406620931.1	aspartate/proton symporter AspP	-
RAS18_RS17150	-	3418775..3419359 (+)	585	WP_406620932.1	TetR family transcriptional regulator	-
RAS18_RS17155	-	3419441..3419776 (+)	336	WP_010790011.1	multidrug efflux SMR transporter	-
RAS18_RS17160	-	3419776..3420090 (+)	315	WP_003326815.1	multidrug efflux SMR transporter	-
RAS18_RS17165	speG	3420116..3420643 (+)	528	WP_003326814.1	spermidine N1-acetyltransferase	-
RAS18_RS17170	-	3420730..3421215 (-)	486	WP_406620933.1	DinB family protein	-
RAS18_RS17180	clpP	3421741..3422337 (+)	597	WP_003326811.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
RAS18_RS17185	-	3422371..3422978 (-)	608	Protein_3329	DJ-1/PfpI family protein	-
RAS18_RS17190	-	3423062..3423637 (-)	576	WP_061570757.1	TIGR00730 family Rossman fold protein	-
RAS18_RS17195	-	3423753..3424073 (+)	321	WP_106044792.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
RAS18_RS17200	-	3424100..3425710 (-)	1611	WP_406620934.1	SulP family inorganic anion transporter	-
RAS18_RS17205	-	3425729..3426313 (-)	585	WP_061570760.1	carbonic anhydrase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21877.15 Da
• Isoelectric Point: 4.7114

>NTDB_id=892060 RAS18_RS17180 WP_003326811.1 3421741..3422337(+) (clpP) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=892060 RAS18_RS17180 WP_003326811.1 3421741..3422337(+) (clpP) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCATTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAACGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAAGTTTTAACACGCAACACTGAAGAACAGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	95.455	100	0.955
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.586	96.465	0.662
clpP	Streptococcus thermophilus LMG 18311	58.031	97.475	0.566
clpP	Streptococcus thermophilus LMD-9	58.031	97.475	0.566
clpP	Streptococcus pneumoniae Rx1	56.701	97.98	0.556
clpP	Streptococcus pneumoniae D39	56.701	97.98	0.556
clpP	Streptococcus pneumoniae R6	56.701	97.98	0.556
clpP	Streptococcus pneumoniae TIGR4	56.701	97.98	0.556
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.124	97.98	0.53
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53