Detailed information NTG0891059

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RYX39_RS17700
• Genome accession: NZ_CP136430
• Coordinates: 3444721..3445317 (+)
• Length: 198 a.a.
• NCBI ID: WP_003219849.1
• Uniprot ID: A0A9W5LL57
• Organism: Bacillus halotolerans strain Q2H2
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3439721..3450317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYX39_RS17670 (RYX39_17670)	-	3440001..3440315 (+)	315	WP_024122952.1	multidrug efflux SMR transporter	-
RYX39_RS17675 (RYX39_17675)	-	3440360..3440875 (-)	516	WP_024122953.1	DUF3231 family protein	-
RYX39_RS17680 (RYX39_17680)	-	3440938..3441087 (+)	150	WP_188323327.1	hypothetical protein	-
RYX39_RS17685 (RYX39_17685)	-	3441165..3442508 (-)	1344	WP_255002041.1	FAD-binding oxidoreductase	-
RYX39_RS17690 (RYX39_17690)	cotR	3442979..3443941 (+)	963	WP_316961109.1	sporulation hydrolase CotR	-
RYX39_RS17700 (RYX39_17700)	clpP	3444721..3445317 (+)	597	WP_003219849.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
RYX39_RS17705 (RYX39_17705)	-	3445352..3445927 (-)	576	WP_106019609.1	TIGR00730 family Rossman fold protein	-
RYX39_RS17710 (RYX39_17710)	-	3446044..3446364 (+)	321	WP_106019610.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
RYX39_RS17715 (RYX39_17715)	-	3446395..3448005 (-)	1611	WP_106019611.1	SulP family inorganic anion transporter	-
RYX39_RS17720 (RYX39_17720)	-	3448024..3448608 (-)	585	WP_255002043.1	carbonic anhydrase	-
RYX39_RS17725 (RYX39_17725)	-	3449012..3449989 (+)	978	WP_151174538.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21873.14 Da
• Isoelectric Point: 4.7114

>NTDB_id=891059 RYX39_RS17700 WP_003219849.1 3444721..3445317(+) (clpP) [Bacillus halotolerans strain Q2H2]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=891059 RYX39_RS17700 WP_003219849.1 3444721..3445317(+) (clpP) [Bacillus halotolerans strain Q2H2]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTTTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGAAGCGG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGCTCTATCACGGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCTTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTTATGATTCACCAGCCTCTTGGCGGAGCTCAAGGTCAAGCGA
CAGAAATTGAAATTGCCGCGAAACGTATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGCGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTCTGACTCGCAACACTGAAGAGCAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	96.465	100	0.965
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.063	96.465	0.657
clpP	Streptococcus thermophilus LMG 18311	59.067	97.475	0.576
clpP	Streptococcus thermophilus LMD-9	59.067	97.475	0.576
clpP	Streptococcus pneumoniae Rx1	57.732	97.98	0.566
clpP	Streptococcus pneumoniae D39	57.732	97.98	0.566
clpP	Streptococcus pneumoniae R6	57.732	97.98	0.566
clpP	Streptococcus pneumoniae TIGR4	57.732	97.98	0.566
clpP	Lactococcus lactis subsp. cremoris KW2	57.216	97.98	0.561
clpP	Streptococcus pyogenes JRS4	56.477	97.475	0.551
clpP	Streptococcus pyogenes MGAS315	56.477	97.475	0.551
clpP	Streptococcus mutans UA159	55.155	97.98	0.54
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.155	97.98	0.54