Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RYX39_RS02030 Genome accession   NZ_CP136430
Coordinates   394419..394559 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Q2H2     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 389419..399559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYX39_RS02025 (RYX39_02025) srfAB 391283..394375 (+) 3093 Protein_355 surfactin non-ribosomal peptide synthetase SrfAB -
  RYX39_RS02030 (RYX39_02030) comS 394419..394559 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=891000 RYX39_RS02030 WP_223203921.1 394419..394559(+) (comS) [Bacillus halotolerans strain Q2H2]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=891000 RYX39_RS02030 WP_223203921.1 394419..394559(+) (comS) [Bacillus halotolerans strain Q2H2]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913